RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 HSPB2Q16082 182 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 PDSS1Q5T2R2 415 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 INTS11Q5TA45 600 aaKnown RBP23.22■■□□□ 1.31
TRIM28-204ENST00000594806 ERICH5Q6P6B1 374 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 ESPNLQ6ZVH7 1005 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 OR10Q1Q8NGQ4 319 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 MBD3L2Q8NHZ7 208 aaPredicted RBP23.22■■□□□ 1.31
TRIM28-204ENST00000594806 WNT2BQ93097 391 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 ZFP3Q96NJ6 502 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 TM9SF2Q99805 663 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 TRIM8Q9BZR9 551 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 EVA1AQ9H8M9 152 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 SERINC1Q9NRX5 453 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 ICE1Q9Y2F5 2266 aa23.22■■□□□ 1.31
TRIM28-204ENST00000594806 CLCA1A8K7I4 914 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 AIM2O14862 343 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 ADAMDEC1O15204 470 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 IL2RAP01589 272 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 GP1BBP13224 206 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 CEACAM8P31997 349 aaPredicted RBP23.21■■□□□ 1.31
TRIM28-204ENST00000594806 PCGF2P35227 344 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 APOBEC1P41238 236 aaKnown RBP23.21■■□□□ 1.31
TRIM28-204ENST00000594806 HTR3AP46098 478 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 SUCLG1P53597 346 aaKnown RBP23.21■■□□□ 1.31
TRIM28-204ENST00000594806 DHRS4L2Q6PKH6 230 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 NCCRP1Q6ZVX7 275 aaPredicted RBP23.21■■□□□ 1.31
TRIM28-204ENST00000594806 CALHM3Q86XJ0 350 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 ZZZ3Q8IYH5 903 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 UBQLNLQ8IYU4 475 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 SDCCAG3Q96C92 435 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 NPAS1Q99742 590 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 DOCK7Q96N67 2140 aa23.21■■□□□ 1.31
TRIM28-204ENST00000594806 SPTAN1Q13813 2472 aaKnown RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 NDUFAB1O14561 156 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 SEC14L5O43304 696 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 RYKP34925 604 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 CLDN15P56746 228 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 CLDN20P56880 219 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 PCBP3P57721 371 aaKnown RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 EPS8Q12929 822 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 VMACQ2NL98 169 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 RABL3Q5HYI8 236 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 FAM91A1Q658Y4 838 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 SEM1Q6ZVN7 128 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 GRINAQ7Z429 371 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 PATL1Q86TB9 770 aaKnown RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 GGNQ86UU5 652 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 LILRA2Q8N149 483 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 SMPDL3BQ92485 455 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 REXO5Q96IC2 774 aaKnown RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 GPATCH1Q9BRR8 931 aaKnown RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 RLIMQ9NVW2 624 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 CLCF1Q9UBD9 225 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 RNF6Q9Y252 685 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 ZNF175Q9Y473 711 aa23.2■■□□□ 1.3
TRIM28-204ENST00000594806 KLF2Q9Y5W3 355 aaPredicted RBP23.2■■□□□ 1.3
TRIM28-204ENST00000594806 CLDN14O95500 239 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 IDH2P48735 452 aaKnown RBP23.19■■□□□ 1.3
TRIM28-204ENST00000594806 MAP2K6P52564 334 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 VEZF1Q14119 521 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 C3orf33Q6P1S2 294 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 PLEKHM3Q6ZWE6 761 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 CLIP4Q8N3C7 705 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 CA5BP1Q8WTZ4 195 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 SLC25A43Q8WUT9 341 aaPredicted RBP23.19■■□□□ 1.3
TRIM28-204ENST00000594806 KLHL15Q96M94 604 aa23.19■■□□□ 1.3
TRIM28-204ENST00000594806 SPIN1Q9Y657 262 aaPredicted RBP23.19■■□□□ 1.3
TRIM28-204ENST00000594806 USP9YO00507 2555 aaPredicted RBP23.18■■□□□ 1.3
TRIM28-204ENST00000594806 A0A0G2JNJ9 132 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 EIF1AYO14602 144 aaKnown RBP23.18■■□□□ 1.3
TRIM28-204ENST00000594806 EFNA2O43921 213 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 SLC1A3P43003 542 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 COPZ1P61923 177 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 MERTKQ12866 999 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 SGCBQ16585 318 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 EEF1A1P5Q5VTE0 462 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 MAMDC2Q7Z304 686 aaPredicted RBP23.18■■□□□ 1.3
TRIM28-204ENST00000594806 ARMC8Q8IUR7 673 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 CCDC197Q8NCU1 140 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 LILRB4Q8NHJ6 448 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 ZNF524Q96C55 264 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 ADGRG7Q96K78 797 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 PINK1Q9BXM7 581 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 TIGARQ9NQ88 270 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 Q9UFV3 132 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 CHST2Q9Y4C5 530 aa23.18■■□□□ 1.3
TRIM28-204ENST00000594806 MED12LQ86YW9 2145 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 ADAM11O75078 769 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 TOXO94900 526 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 RCBTB2O95199 551 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 ACAA2P42765 397 aaKnown RBP23.17■■□□□ 1.3
TRIM28-204ENST00000594806 NUDT2P50583 147 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 CTU2Q2VPK5 515 aaKnown RBP23.17■■□□□ 1.3
TRIM28-204ENST00000594806 OR2A2Q6IF42 318 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 CCDC80Q76M96 950 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 OR2V1Q8NHB1 315 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 RASSF5Q8WWW0 418 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 ZNF583Q96ND8 569 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 KLHL28Q9NXS3 571 aa23.17■■□□□ 1.3
TRIM28-204ENST00000594806 ZNF629Q9UEG4 869 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms