RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 A0A0J9YW62 118 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 AP3D1O14617 1153 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 SLC22A2O15244 555 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 PGM3O95394 542 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 IL18BPO95998 194 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 RYKP34925 604 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 OPRM1P35372 400 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 HCFC1P51610 2035 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 DLX5P56178 289 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 EEF1A1P68104 462 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 CDK6Q00534 326 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 FOXF2Q12947 444 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 SELPLGQ14242 412 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 CAPRIN1Q14444 709 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 SGCBQ16585 318 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 MMEL1Q495T6 779 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 C3orf33Q6P1S2 294 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 GCNT2Q8N0V5 402 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 ZNF563Q8TA94 476 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 FNDC9Q8TBE3 224 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 INTS12Q96CB8 462 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 ELAC2Q9BQ52 826 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 ACER3Q9NUN7 267 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 RLIMQ9NVW2 624 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 PAQR5Q9NXK6 330 aaPredicted RBP13.08□□□□□ -0.32
VRK3-206ENST00000594090 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 IFT52Q9Y366 437 aa13.08□□□□□ -0.32
VRK3-206ENST00000594090 GJE1A6NN92 205 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 FXYD1O00168 92 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 MRASO14807 208 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 CCDC22O60826 627 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 PABPC4LP0CB38 370 aaKnown RBP13.07□□□□□ -0.32
VRK3-206ENST00000594090 ETS2P15036 469 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 DRD4P21917 467 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 GNGT1P63211 74 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 EPS8Q12929 822 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 SCARB2Q14108 478 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 ADRM1Q16186 407 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 HBMQ6B0K9 141 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 REEP3Q6NUK4 255 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 ZNF440Q8IYI8 595 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 ACBD4Q8NC06 268 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 SLC39A3Q9BRY0 314 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 CCDC106Q9BWC9 280 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 SPATA9Q9BWV2 254 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
VRK3-206ENST00000594090 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 FAAHO00519 579 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 HNRNPRO43390 633 aaKnown RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 CXCL13O43927 109 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 NPPAP01160 153 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 FCGR2AP12318 317 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 SLC6A2P23975 617 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 IDH2P48735 452 aaKnown RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 ASCL1P50553 236 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 AGFG1P52594 562 aaKnown RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 MERTKQ12866 999 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 CYLC2Q14093 348 aaPredicted RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 CYP51A1Q16850 503 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 ZSWIM7Q19AV6 140 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 TMEM176BQ3YBM2 270 aaPredicted RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 ZNF311Q5JNZ3 666 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 OR2A2Q6IF42 318 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 PPP4R4Q6NUP7 873 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 NET1Q7Z628 596 aaPredicted RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 KRT73Q86Y46 540 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 PTOV1Q86YD1 416 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 CLIP4Q8N3C7 705 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 C11orf65Q8NCR3 313 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 HIPK4Q8NE63 616 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 KAT8Q9H7Z6 458 aaKnown RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 COQ10BQ9H8M1 238 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 MCTS1Q9ULC4 181 aaKnown RBP13.06□□□□□ -0.32
VRK3-206ENST00000594090 ADGRG4Q8IZF6 3080 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 MED12LQ86YW9 2145 aa13.06□□□□□ -0.32
VRK3-206ENST00000594090 LOC100653049A0A140TA62 436 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 A0A1W2PNV4 684 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 GMNCA6NCL1 334 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 SNX3O60493 162 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 TNFSF13O75888 250 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 KRT34O76011 436 aa13.05□□□□□ -0.32
VRK3-206ENST00000594090 AQP8O94778 261 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms