RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 DCST1Q5T197 706 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 PLAG1Q6DJT9 500 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ZNF770Q6IQ21 691 aaPredicted RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 APOOLQ6UXV4 268 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PLEKHM3Q6ZWE6 761 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PPP1R32Q7Z5V6 425 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 DRAXINQ8NBI3 349 aaPredicted RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 HOXD1Q9GZZ0 328 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 AKAP13Q12802 2813 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 NSG1A0A0A6YYJ2 146 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SCDO00767 359 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SLC30A4O14863 429 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 OR10H3O60404 316 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 GABARAPO95166 117 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SOX14O95416 240 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 CSTAP01040 98 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 TBXA2RP21731 343 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 CHMP24386 653 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 HTR2AP28223 471 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 LCN1P31025 176 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 CRISP1P54107 249 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SMIM11AP58511 58 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PSPHP78330 225 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 CD226Q15762 336 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 EXT1Q16394 746 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 NDUFAF6Q330K2 333 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 P2RY8Q86VZ1 359 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 OIT3Q8WWZ8 545 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 GGHQ92820 318 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 SIGLEC11Q96RL6 698 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 FUZQ9BT04 418 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 GPR87Q9BY21 358 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 ZNF160Q9HCG1 818 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 PLCXD1Q9NUJ7 323 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 GPR83Q9NYM4 423 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 MYOTQ9UBF9 498 aa12.12□□□□□ -0.47
VRK3-205ENST00000593919 TESQ9UGI8 421 aaKnown RBP12.12□□□□□ -0.47
VRK3-205ENST00000593919 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 OR6C70A6NIJ9 312 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 CLCA1A8K7I4 914 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 CDRT15L2A8MXV6 281 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 FAAHO00519 579 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 CLPXO76031 633 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 NADKO95544 446 aaPredicted RBP12.11□□□□□ -0.47
VRK3-205ENST00000593919 THY1P04216 161 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 GABRB1P18505 474 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 ACVR2AP27037 513 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 C21orf33P30042 268 aaPredicted RBP12.11□□□□□ -0.47
VRK3-205ENST00000593919 UGT2B15P54855 530 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 MLLT10P55197 1068 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 CDC42P60953 191 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 VBP1P61758 197 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 IL10RAQ13651 578 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 FNDC7Q5VTL7 733 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 NR4A3Q92570 626 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 ZBTB20Q9HC78 741 aaPredicted RBP12.11□□□□□ -0.47
VRK3-205ENST00000593919 MMP25Q9NPA2 562 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 SLC35A3Q9Y2D2 325 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
VRK3-205ENST00000593919 CFAP47Q6ZTR5 3102 aa12.11□□□□□ -0.47
VRK3-205ENST00000593919 ZAR1LA6NP61 321 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 MASP2O00187 686 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 FMO6PO60774 539 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 CYP7B1O75881 506 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 OR2J2O76002 312 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ADAP00813 363 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 CDK1P06493 297 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 STSP08842 583 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 RBMS1P29558 406 aaKnown RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 IFNA8P32881 189 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ADH7P40394 386 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ACAA2P42765 397 aaKnown RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 ST3GAL3Q11203 375 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 OR1Q1Q15612 314 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ZSWIM7Q19AV6 140 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 PODNL1Q6PEZ8 512 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 TMPRSS7Q7RTY8 843 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 GDF7Q7Z4P5 450 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 FAM71CQ8NEG0 241 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 NDNFQ8TB73 568 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 M1APQ8TC57 530 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms