RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PDE9AO76083 593 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 NGFRP08138 427 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 OR12D1P0DN82 309 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 TBXA2RP21731 343 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 GDF1P27539 372 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PTPN6P29350 595 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 ANXA11P50995 505 aaKnown RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 ATAD3BQ5T9A4 648 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 ANKRD13BQ86YJ7 626 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PARP8Q8N3A8 854 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 WDSUB1Q8N9V3 476 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 CHDHQ8NE62 594 aaPredicted RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 OR4C3Q8NH37 302 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 ZFP90Q8TF47 636 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 XAGE5Q8WWM1 108 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 WDR12Q9GZL7 423 aaKnown RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 GORASP2Q9H8Y8 452 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 UBQLN4Q9NRR5 601 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PLSCR2Q9NRY7 297 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 RP1L1Q8IWN7 2480 aaPredicted RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 A0A096LPI6 279 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 CLDN25C9JDP6 229 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 J3QRK9 145 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 C1QCP02747 245 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 HOXB6P17509 224 aaKnown RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 GGT1P19440 569 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 HSF1Q00613 529 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 C6orf141Q5SZD1 244 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 DLEU7Q6UYE1 221 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 C16orf62Q7Z3J2 963 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PLCZ1Q86YW0 608 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 SVOPLQ8N434 492 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 OR8J3Q8NGG0 315 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 POP5Q969H6 163 aaKnown RBP17.86■□□□□ 0.45
LSM4-203ENST00000593829 SDF2Q99470 211 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 SEPHS2Q99611 448 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PSD2Q9BQI7 771 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 UBQLN3Q9H347 655 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 TPT1P8Q9HAU6 139 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 ENPP5Q9UJA9 477 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 OSGIN2Q9Y236 505 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 PCDHB14Q9Y5E9 798 aa17.86■□□□□ 0.45
LSM4-203ENST00000593829 SVILO95425 2214 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 UBR5O95071 2799 aaPredicted RBP17.85■□□□□ 0.45
LSM4-203ENST00000593829 CBR3O75828 277 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 OXSR1O95747 527 aaPredicted RBP17.85■□□□□ 0.45
LSM4-203ENST00000593829 IGHG3P01860 377 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 CELA3AP09093 270 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 HPGDP15428 266 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 CHRNB3Q05901 458 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.85■□□□□ 0.452e-9■■■□□ 15.1
LSM4-203ENST00000593829 ARHGAP11BQ3KRB8 267 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 GTDC1Q4AE62 458 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 HEPHL1Q6MZM0 1159 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 ARHGAP11AQ6P4F7 1023 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 MARCH3Q86UD3 253 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 PIK3C3Q8NEB9 887 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 S100ZQ8WXG8 99 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 RAB8BQ92930 207 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 SH3YL1Q96HL8 342 aaPredicted RBP17.85■□□□□ 0.45
LSM4-203ENST00000593829 UGT2B28Q9BY64 529 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 TRIM8Q9BZR9 551 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 HOXD1Q9GZZ0 328 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 LDAHQ9H6V9 325 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 HMG20AQ9NP66 347 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 ACKR4Q9NPB9 350 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 FAM118AQ9NWS6 357 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 PPP4R1LQ9P1A2 415 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 DNAJB9Q9UBS3 223 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 PCDHGB1Q9Y5G3 927 aa17.85■□□□□ 0.45
LSM4-203ENST00000593829 A0A1B0GTH9 108 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 TRAPPC6AO75865 159 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 OTUD3Q5T2D3 398 aaPredicted RBP17.84■□□□□ 0.45
LSM4-203ENST00000593829 LRIF1Q5T3J3 769 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SLC16A12Q6ZSM3 486 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 ZDHHC13Q8IUH4 622 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 BPIFB6Q8NFQ5 453 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SLC35B4Q969S0 331 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 OSBPL10Q9BXB5 764 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 HELZ2Q9BYK8 2649 aaKnown RBP17.84■□□□□ 0.45
LSM4-203ENST00000593829 ALG1L2C9J202 215 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 HMGN4O00479 90 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SCDO00767 359 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 ADAM10O14672 748 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SLC19A2O60779 497 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 STX11O75558 287 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 ANGPTL1O95841 491 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 HPNP05981 417 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 PPP2R2BQ00005 443 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 IL18R1Q13478 541 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 TOMM20Q15388 145 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 FLYWCH1Q4VC44 716 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 OR5M10Q6IEU7 315 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 APOOLQ6UXV4 268 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 TRILQ7L0X0 811 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 ZNF566Q969W8 418 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SDCCAG3Q96C92 435 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 RTN4RQ9BZR6 473 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 TOR3AQ9H497 397 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 HHATLQ9HCP6 504 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms