RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ACER3Q9NUN7 267 aa13.48□□□□□ -0.25
DDX39A-221ENST00000593026 KLHL28Q9NXS3 571 aa13.48□□□□□ -0.25
DDX39A-221ENST00000593026 TMEM181Q9P2C4 612 aa13.48□□□□□ -0.25
DDX39A-221ENST00000593026 MEMO1Q9Y316 297 aa13.48□□□□□ -0.25
DDX39A-221ENST00000593026 MED12Q93074 2177 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 GSTA4O15217 222 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 SEC14L5O43304 696 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 FRS3O43559 492 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 SEMA7AO75326 666 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 AGFG2O95081 481 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 NTN1O95631 604 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 IFNA14P01570 189 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 T-ENOLP0DO92 83 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 PRG2P13727 222 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 ACAA2P42765 397 aaKnown RBP13.47□□□□□ -0.25
DDX39A-221ENST00000593026 PER3P56645 1201 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 COPZ1P61923 177 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 RAC1P63000 192 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.256e-8■■■□□ 18.6
DDX39A-221ENST00000593026 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-221ENST00000593026 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 MTFR2Q6P444 385 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 GRINAQ7Z429 371 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 COMTD1Q86VU5 262 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 RBM15BQ8NDT2 890 aaKnown RBP13.47□□□□□ -0.25
DDX39A-221ENST00000593026 TNIP2Q8NFZ5 429 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 TMEM185BQ9H7F4 350 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 ERRFI1Q9UJM3 462 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-221ENST00000593026 MYO18BQ8IUG5 2567 aa13.47□□□□□ -0.25
DDX39A-221ENST00000593026 SYT5O00445 386 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 EPPINO95925 133 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 C8BP07358 591 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 IL11P20809 199 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 KDELR2P33947 212 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 APOBEC1P41238 236 aaKnown RBP13.46□□□□□ -0.25
DDX39A-221ENST00000593026 SLC1A3P43003 542 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 HTR3AP46098 478 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 KCNJ5P48544 419 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CRYBA2P53672 197 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 DLX5P56178 289 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CLDN20P56880 219 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 RGS8P57771 180 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-221ENST00000593026 SELENBP1Q13228 472 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 DUSP7Q16829 419 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 ACSF3Q4G176 576 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-221ENST00000593026 SAMD4BQ5PRF9 694 aaKnown RBP13.46□□□□□ -0.25
DDX39A-221ENST00000593026 C3orf33Q6P1S2 294 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 POMZP3Q6PJE2 187 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CHMP1BQ7LBR1 199 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CADM2Q8N3J6 435 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 RPRMLQ8N4K4 120 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 FAM26EQ8N5C1 309 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 RNF148Q8N7C7 305 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 GPR32P1Q8NGA4 272 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 ZPLD1Q8TCW7 415 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 FIG4Q92562 907 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 DMRTA2Q96SC8 542 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CDRT15Q96T59 188 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 TUBA1CQ9BQE3 449 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 EVA1AQ9H8M9 152 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 CTPS2Q9NRF8 586 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 PRDM4Q9UKN5 801 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.25
DDX39A-221ENST00000593026 RELNP78509 3460 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 GJE1A6NN92 205 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 H0YC42 278 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 CXCR6O00574 342 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 EIF1AYO14602 144 aaKnown RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 EFNA2O43921 213 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 UBOX5O94941 541 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 OPN1LWP04000 364 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 CD247P20963 164 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 SFTPDP35247 375 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 CPOXP36551 454 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 POLR2HP52434 150 aaKnown RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 SUCLG1P53597 346 aaKnown RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 NCALDP61601 193 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 HOXC5Q00444 222 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 RTL6Q6ICC9 239 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 WBP2NLQ6ICG8 309 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 TMEM211Q6ICI0 200 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 RPTNQ6XPR3 784 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 GGNQ86UU5 652 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 ATP6V1C2Q8NEY4 427 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 PHF10Q8WUB8 498 aaKnown RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 PROX1Q92786 737 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 TTYH2Q9BSA4 534 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 TESQ9UGI8 421 aaKnown RBP13.45□□□□□ -0.26
DDX39A-221ENST00000593026 PACSIN3Q9UKS6 424 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
DDX39A-221ENST00000593026 SPIN1Q9Y657 262 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms