RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	ANKRD19P	Q9H560	264 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	PRR23D1	E9PI22	279 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	POP7	O75817	140 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	GATB	O75879	557 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	TRHR	P34981	398 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	GCGR	P47871	477 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	KHK	P50053	298 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	MAZ	P56270	477 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	PSMA6	P60900	246 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	SEC61A1	P61619	476 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	MLC1	Q15049	377 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	SLC25A25	Q6KCM7	469 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	MEPCE	Q7L2J0	689 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	FAM129C	Q86XR2	697 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	NRSN1	Q8IZ57	195 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	OR6V1	Q8N148	313 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	ZNF454	Q8N9F8	522 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	OR10H4	Q8NGA5	316 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	KAT2A	Q92830	837 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	RSPRY1	Q96DX4	576 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	MRPS24	Q96EL2	167 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	LRIG1	Q96JA1	1093 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	SAMD8	Q96LT4	415 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	ARHGDIG	Q99819	225 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	ZCCHC4	Q9H5U6	513 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	MED20	Q9H944	212 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	PLEKHA1	Q9HB21	404 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	ZDHHC4	Q9NPG8	344 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	IRAK3	Q9Y616	596 aa		13.4	□□□□□ -0.26
RFX2-222	ENST00000592546	HNRNPCL2	B2RXH8	293 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	SYT5	O00445	386 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	PLAT	P00750	562 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	APOC3	P02656	99 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ASGR2	P07307	311 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	NDUFV2	P19404	249 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ACVR1B	P36896	505 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	GPR1	P46091	355 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	STXBP1	P61764	594 aa	Known RBP	13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	MAPK14	Q16539	360 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	TMUB2	Q71RG4	321 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	SYT9	Q86SS6	491 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	NRM	Q8IXM6	262 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	OR13C5	Q8NGS8	318 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ELP4	Q96EB1	424 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	UBQLN3	Q9H347	655 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	SAV1	Q9H4B6	383 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	GLIPR2	Q9H4G4	154 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	SCPEP1	Q9HB40	452 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	HPF1	Q9NWY4	346 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	NTM	Q9P121	344 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	LRRK1	Q38SD2	2015 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	TRAV1-2	A0A0B4J238	106 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546		A0A0G2JPF8	293 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	OTOL1	A6NHN0	477 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	HNRNPCL3	B7ZW38	293 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546		D6RAR5	112 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	HNRNPCL4	P0DMR1	293 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	PPP3CB	P16298	524 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	TYRP1	P17643	537 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	VIPR2	P41587	438 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ST8SIA6	P61647	398 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	DECR1	Q16698	335 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	TMEM240	Q5SV17	173 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	RPTN	Q6XPR3	784 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	PDZD9	Q8IXQ8	264 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	C7orf61	Q8IZ16	206 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	MEIOB	Q8N635	442 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	KISS1R	Q969F8	398 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF764	Q96H86	408 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	YIPF4	Q9BSR8	244 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	MS4A8	Q9BY19	250 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	EPHX3	Q9H6B9	360 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	IFT22	Q9H7X7	185 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	CPNE7	Q9UBL6	633 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF69	Q9UC07	566 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	FBXL3	Q9UKT7	428 aa		13.39	□□□□□ -0.27
RFX2-222	ENST00000592546	NAP1L6	A6NFF2	107 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	HMSD	A8MTL9	139 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	CDC42EP2	O14613	210 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	TMPRSS11D	O60235	418 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	PIP5K1C	O60331	668 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	SDC3	O75056	442 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	PAPLN	O95428	1278 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	ADRB1	P08588	477 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	ADH5	P11766	374 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	C6	P13671	934 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	CTNNB1	P35222	781 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	TAS2R43	P59537	309 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	C9orf64	Q5T6V5	341 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	NUS1	Q96E22	293 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC38A3	Q99624	504 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	HCAR1	Q9BXC0	346 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	ZDHHC5	Q9C0B5	715 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	EVA1A	Q9H8M9	152 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	NOX3	Q9HBY0	568 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	LHX9	Q9NQ69	397 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	INPP5E	Q9NRR6	644 aa		13.38	□□□□□ -0.27
RFX2-222	ENST00000592546	TAS2R5	Q9NYW4	299 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms