RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SUMO3P55854 103 aaPredicted RBP9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZNF117Q03924 483 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 KRT72Q14CN4 511 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZNF141Q15928 474 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 PLPPR5Q32ZL2 321 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 SLC25A35Q3KQZ1 300 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 AGKQ53H12 422 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
SDF2-208ENST00000589788 SEM1Q6ZVN7 128 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 OLIG3Q7RTU3 272 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 GRAMD2AQ8IUY3 354 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZNF619Q8N2I2 560 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 TNIP2Q8NFZ5 429 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZBTB8AQ96BR9 441 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 UCK2Q9BZX2 261 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZNF350Q9GZX5 532 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 MED17Q9NVC6 651 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 LIPT1Q9Y234 373 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 AP4B1Q9Y6B7 739 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 C7orf72A4D263 438 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 SERINC4A6NH21 518 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 ZNF264O43296 627 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 KIAA0513O60268 411 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 EIF4E2O60573 245 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 UGT2B17O75795 530 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CYP7B1O75881 506 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TOXO94900 526 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 H6PDO95479 791 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CSTAP01040 98 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 GUSBP08236 651 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 NR2F1P10589 423 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 BMP5P22003 454 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 ME2P23368 584 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 PRDX6P30041 224 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CEACAM8P31997 349 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 EIF1P41567 113 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 CRATP43155 626 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 P2RX1P51575 399 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CCR4P51679 360 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 RPS3AP61247 264 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 MAPRE2Q15555 327 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TMEM44Q2T9K0 475 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 NDUFAF6Q330K2 333 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TYW3Q6IPR3 259 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 FDX2Q6P4F2 183 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CBLN3Q6UW01 205 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 EIF3MQ7L2H7 374 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 P4HA3Q7Z4N8 544 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 JAZF1Q86VZ6 243 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 FUNDC1Q8IVP5 155 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 GTPBP8Q8N3Z3 284 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 TOR1AIP2Q8NFQ8 470 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 ZFP90Q8TF47 636 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TSPEARQ8WU66 669 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 OIT3Q8WWZ8 545 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 GTF2H4Q92759 462 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 RNF145Q96MT1 663 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 ZFP3Q96NJ6 502 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TRNT1Q96Q11 434 aaKnown RBP9.34□□□□□ -0.91
SDF2-208ENST00000589788 RAD21L1Q9H4I0 556 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 TPT1P8Q9HAU6 139 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 SLC6A13Q9NSD5 602 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 CLCF1Q9UBD9 225 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 P2RX2Q9UBL9 471 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 KIAA1549Q9HCM3 1950 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 DOCK7Q96N67 2140 aa9.34□□□□□ -0.91
SDF2-208ENST00000589788 A0A096LPI6 279 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 TMEM247A6NEH6 219 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 SLC22A20A6NK97 555 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 B2RBV5 119 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 C19orf84I3L1E1 186 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 UBOX5O94941 541 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 C1QCP02747 245 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 UBTFL6P0CB48 400 aaPredicted RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 TMIGD3P0DMS9 266 aaPredicted RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 ETFAP13804 333 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 CTSSP25774 331 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 OPRM1P35372 400 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 CLDN20P56880 219 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 DSTNP60981 165 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 CHRNEQ04844 493 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 FUT5Q11128 374 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 CBFBQ13951 182 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 SYPL1Q16563 259 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 SGCBQ16585 318 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 GTDC1Q4AE62 458 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 MEX3BQ6ZN04 569 aaKnown RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 FRRS1Q6ZNA5 592 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 ADGRE4PQ86SQ3 457 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 LIX1LQ8IVB5 337 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 ANKFN1Q8N957 763 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 C9orf106Q8NAJ2 232 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 NAXEQ8NCW5 288 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 OR5W2Q8NH69 310 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms