RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ETV1P50549 477 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ATP12AP54707 1039 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 GFERP55789 205 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ACSM1Q08AH1 577 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ITGADQ13349 1161 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TPBGQ13641 420 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ATP1A4Q13733 1029 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 OXA1LQ15070 435 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ZNF181Q2M3W8 571 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 PDZK1Q5T2W1 519 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 NPSR1Q6W5P4 371 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DGAT2L6Q6ZPD8 337 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 CXXC5Q7LFL8 322 aaKnown RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 BCDIN3DQ7Z5W3 292 aaKnown RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 LAPTM4BQ86VI4 370 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 PHC2Q8IXK0 858 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 LNX2Q8N448 690 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 KLHL36Q8N4N3 616 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 LSMEM1Q8N8F7 131 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 MMABQ96EY8 250 aaPredicted RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 SAMD8Q96LT4 415 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 OR1F2PQ96R84 312 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ELF4Q99607 663 aaPredicted RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 ZNF426Q9BUY5 554 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 CNPPD1Q9BV87 410 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DPH1Q9BZG8 443 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 UBQLN3Q9H347 655 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 EXOSC4Q9NPD3 245 aaKnown RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 INPP5EQ9NRR6 644 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 FBXO34Q9NWN3 711 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 H2AFY2Q9P0M6 372 aaPredicted RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 SLC35A3Q9Y2D2 325 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 CSNK1G3Q9Y6M4 447 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DSPP15924 2871 aaKnown RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 ANKRD11Q6UB99 2663 aaPredicted RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 GOLGA4Q13439 2230 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 MN1Q10571 1320 aaPredicted RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 A0A1B0GWA3 101 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 HTR3EA5X5Y0 456 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SLC22A31A6NKX4 558 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 LOC110117498-PIK3R3F6TDL0 507 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 BHLHE40O14503 412 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CDC42EP2O14613 210 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 AKAP8O43823 692 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 UPK1BO75841 260 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 IFNGP01579 166 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 IL1AP01583 271 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CTSBP07858 339 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 GKN3PP0CG01 181 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 GAAP10253 952 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PAICSP22234 425 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 LCN1P31025 176 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SSTR4P31391 388 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SLC6A6P31641 620 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 GABRA5P31644 462 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SLC1A3P43003 542 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CRYBB2P43320 205 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 GPR143P51810 404 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 MAT1AQ00266 395 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 BDH1Q02338 343 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PLAURQ03405 335 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ZNF267Q14586 743 aaPredicted RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 DEFB133Q30KQ1 61 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 YOD1Q5VVQ6 348 aaPredicted RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 NIPAL3Q6P499 406 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ARHGAP11AQ6P4F7 1023 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SMARCD3Q6STE5 483 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 HSDL2Q6YN16 418 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 WDR88Q6ZMY6 472 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 QSOX2Q6ZRP7 698 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PRSS42Q7Z5A4 293 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ZAR1Q86SH2 424 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 MEX3DQ86XN8 651 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 KMT5CQ86Y97 462 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SLITRK4Q8IW52 837 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ZNF614Q8N883 585 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 DRAXINQ8NBI3 349 aaPredicted RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 GALNT6Q8NCL4 622 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 OR51Q1Q8NH59 317 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PFN4Q8NHR9 129 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 DOK4Q8TEW6 326 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CNOT9Q92600 299 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 BPIFA2Q96DR5 249 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 AHCYL2Q96HN2 611 aaKnown RBP9.17□□□□□ -0.94
VPS25-202ENST00000589219 MED18Q9BUE0 208 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ASPNQ9BXN1 380 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 HOXD1Q9GZZ0 328 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 NUAK2Q9H093 628 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ERVMER34-1Q9H9K5 563 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 SMURF1Q9HCE7 757 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CMC2Q9NRP2 79 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 RPS6KB2Q9UBS0 482 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 CBLCQ9ULV8 474 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 ERVK-19Q9WJR5 959 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 GPR52Q9Y2T5 361 aa9.17□□□□□ -0.94
VPS25-202ENST00000589219 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms