RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 CDC73Q6P1J9 531 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 CCNYL1Q8N7R7 359 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 ZNF614Q8N883 585 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 OR52E4Q8NGH9 312 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 CEP70Q8NHQ1 597 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 NTMQ9P121 344 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
SF3A2-204ENST00000589118 NUP214P35658 2090 aaPredicted RBP13.22□□□□□ -0.29
SF3A2-204ENST00000589118 TTC36A6NLP5 189 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 GJE1A6NN92 205 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 ATP6V1G2-DDX39BF2Z307 99 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 SEC22BO75396 215 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 ENO1P06733 434 aaKnown RBP13.22□□□□□ -0.29
SF3A2-204ENST00000589118 GSTM5P46439 218 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 PDLIM4P50479 330 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 PRKAA2P54646 552 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 POU6F2P78424 691 aaPredicted RBP13.22□□□□□ -0.29
SF3A2-204ENST00000589118 LCP2Q13094 533 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 SQLEQ14534 574 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 KIAA0040Q15053 153 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 QPRTQ15274 297 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 GABRA6Q16445 453 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 IQCCQ4KMZ1 466 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 KLHL26Q53HC5 615 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 EXOSC6Q5RKV6 272 aaKnown RBP13.22□□□□□ -0.29
SF3A2-204ENST00000589118 FBXW9Q5XUX1 488 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 GALNT5Q7Z7M9 940 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 MISPQ8IVT2 679 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 MS4A4EQ96PG1 132 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 TSSK3Q96PN8 268 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 SH3BP4Q9P0V3 963 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 CCL27Q9Y4X3 112 aa13.22□□□□□ -0.29
SF3A2-204ENST00000589118 GPC6Q9Y625 555 aaPredicted RBP13.22□□□□□ -0.29
SF3A2-204ENST00000589118 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 SERTM1A2A2V5 107 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 TCF21O43680 179 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 RGS9O75916 674 aaPredicted RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 VENTXO95231 258 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 ATP5F1P24539 256 aaPredicted RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 CCR4P51679 360 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 PKNOX1P55347 436 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 KLHL17Q6TDP4 642 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 MEX3DQ86XN8 651 aaKnown RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 TMCO5AQ8N6Q1 288 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 ACMSDQ8TDX5 336 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 MZB1Q8WU39 189 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 FAM120BQ96EK7 910 aaKnown RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 VRK1Q99986 396 aaPredicted RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 PIMREGQ9BSJ6 248 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 BTBD2Q9BX70 525 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 ADAM19Q9H013 955 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 PSMC3IPQ9P2W1 217 aaPredicted RBP13.21□□□□□ -0.29
SF3A2-204ENST00000589118 MOKQ9UQ07 419 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 PMF1-BGLAPU3KQ54 211 aa13.21□□□□□ -0.29
SF3A2-204ENST00000589118 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 CYP7B1O75881 506 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 ITGA5P08648 1049 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 EGR1P18146 543 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 HNF1AP20823 631 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 APOBEC3AP31941 199 aaPredicted RBP13.2□□□□□ -0.3
SF3A2-204ENST00000589118 SERPINB4P48594 390 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 DIO1P49895 249 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 CHRNB3Q05901 458 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 SELENBP1Q13228 472 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 MLC1Q15049 377 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 FAM174BQ3ZCQ3 159 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 CLEC6AQ6EIG7 209 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 CCDC103Q8IW40 242 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
SF3A2-204ENST00000589118 DEPDC4Q8N2C3 294 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 PPCDCQ96CD2 204 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 L3HYPDHQ96EM0 354 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 MUS81Q96NY9 551 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 THUMPD3Q9BV44 507 aaKnown RBP13.2□□□□□ -0.3
SF3A2-204ENST00000589118 BPESC1Q9GZL8 116 aa13.2□□□□□ -0.3
SF3A2-204ENST00000589118 NOSIPQ9Y314 301 aaKnown RBP13.2□□□□□ -0.3
SF3A2-204ENST00000589118 CENPVL1A0A0U1RR11 272 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 ZNF716A6NP11 495 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 SULT2B1O00204 365 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 KLF11O14901 512 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 GSTA1P08263 222 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 CSF3P09919 207 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 SDC1P18827 310 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 SLC25A53Q5H9E4 307 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 IKBIPQ70UQ0 350 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 TRIM46Q7Z4K8 759 aa13.19□□□□□ -0.3
SF3A2-204ENST00000589118 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
SF3A2-204ENST00000589118 OR2T11Q8NH01 316 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms