RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM176BQ3YBM2 270 aaPredicted RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SLC25A53Q5H9E4 307 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 MSRB3Q8IXL7 192 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF295-AS1Q8N0V1 137 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SLC38A5Q8WUX1 472 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 CNOT9Q92600 299 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 PMM1Q92871 262 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 C14orf79Q96F83 325 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 RBM24Q9BX46 236 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF385DQ9H6B1 395 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 TIGARQ9NQ88 270 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SLC25A37Q9NYZ2 338 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 KCNN3Q9UGI6 736 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 LEF1Q9UJU2 399 aaPredicted RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ETV2O00321 342 aaPredicted RBP13.29□□□□□ -0.28
ATG4D-207ENST00000587256 NUDT7P0C024 238 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 TFPTP0C1Z6 253 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 KIR2DL3P43628 341 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 ARFIP2P53365 341 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 CARD18P57730 90 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 PLAURQ03405 335 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 MAPK11Q15759 364 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 GCNT6Q5T4J0 391 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 MRPL2Q5T653 305 aaKnown RBP13.29□□□□□ -0.28
ATG4D-207ENST00000587256 METTL21CQ5VZV1 264 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF836Q6ZNA1 936 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 DHDDSQ86SQ9 333 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 KIF18BQ86Y91 864 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 OR52P1PQ8NH57 321 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 OSTF1Q92882 214 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 MAL2Q969L2 176 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 CPNE4Q96A23 557 aaPredicted RBP13.29□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF524Q96C55 264 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 SLC52A3Q9NQ40 469 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 SERINC1Q9NRX5 453 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 ACER3Q9NUN7 267 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 GALNT8Q9NY28 637 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 JKAMPQ9P055 326 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 CORO2BQ9UQ03 480 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 EMC9Q9Y3B6 208 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 SPIN1Q9Y657 262 aaPredicted RBP13.29□□□□□ -0.28
ATG4D-207ENST00000587256 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
ATG4D-207ENST00000587256 MED12LQ86YW9 2145 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 EVPLLA8MZ36 301 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 AP3D1O14617 1153 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 ATP8B1O43520 1251 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 EFNA2O43921 213 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 DNAJA2O60884 412 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 CD1EP15812 388 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 CTBP2P56545 445 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 LARS2Q15031 903 aaKnown RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF239Q16600 458 aaKnown RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 PLEKHM3Q6ZWE6 761 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM200AQ86VY9 491 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 VRK2Q86Y07 508 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 ZZZ3Q8IYH5 903 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 BBS10Q8TAM1 723 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 SLC25A43Q8WUT9 341 aaPredicted RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 GMPPAQ96IJ6 420 aaPredicted RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 COQ10BQ9H8M1 238 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 CLEC4AQ9UMR7 237 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 PROCRQ9UNN8 238 aa13.28□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF443Q9Y2A4 671 aaPredicted RBP13.28□□□□□ -0.28
ATG4D-207ENST00000587256 TRBV5-3A0A0A0MS03 114 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 A0A1W2PNR3 127 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 CFAP73A6NFT4 308 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 MSTNO14793 375 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
ATG4D-207ENST00000587256 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 TFPIP10646 304 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 BMP2P12643 396 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 KIR2DL2P43627 348 aaPredicted RBP13.27□□□□□ -0.29
ATG4D-207ENST00000587256 IDH2P48735 452 aaKnown RBP13.27□□□□□ -0.29
ATG4D-207ENST00000587256 SORDQ00796 357 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 NFYCQ13952 458 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 SYT14P1Q58G82 188 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 RNF220Q5VTB9 566 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 CGB2Q6NT52 195 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 FAM214BQ7L5A3 538 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 GRINAQ7Z429 371 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 BTLAQ7Z6A9 289 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF440Q8IYI8 595 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 NFKBIDQ8NI38 313 aa13.27□□□□□ -0.29
ATG4D-207ENST00000587256 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms