RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 ZNF136P52737 540 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 MERTKQ12866 999 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SELENBP1Q13228 472 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SCARB2Q14108 478 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 CAPRIN1Q14444 709 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 PON3Q15166 354 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 CYP51A1Q16850 503 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 POMZP3Q6PJE2 187 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF836Q6ZNA1 936 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF550Q7Z398 422 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SNX32Q86XE0 403 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 RP9Q8TA86 221 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 FIG4Q92562 907 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 REXO5Q96IC2 774 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 CPPED1Q9BRF8 314 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SPATA5L1Q9BVQ7 753 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SPATA9Q9BWV2 254 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 IKZF5Q9H5V7 419 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 RLIMQ9NVW2 624 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 GID8Q9NWU2 228 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 DNAJB12Q9NXW2 375 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 MCTS1Q9ULC4 181 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
SMARCA4-212ENST00000586985 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 HNRNPRO43390 633 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 SERPINB7O75635 380 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 CRHP06850 196 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 FCGR2AP12318 317 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 FKBP2P26885 142 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 SLC7A1P30825 629 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 HTR3AP46098 478 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 MTPNP58546 118 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 COPZ1P61923 177 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 RBBP4Q09028 425 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 FOXF2Q12947 444 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 TRMT5Q32P41 509 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 REP15Q6BDI9 236 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 GTF2IRD2BQ6EKJ0 949 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 NANOGP8Q6NSW7 305 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 PLEKHM3Q6ZWE6 761 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 MTDHQ86UE4 582 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 GTF2IRD2Q86UP8 949 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 HIPK4Q8NE63 616 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 FNDC9Q8TBE3 224 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF524Q96C55 264 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 LRRC58Q96CX6 371 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 SFXN3Q9BWM7 321 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 NANOGQ9H9S0 305 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 ARMCX1Q9P291 453 aa13.04□□□□□ -0.32
SMARCA4-212ENST00000586985 GTF3C1Q12789 2109 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 SYT5O00445 386 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 AP3D1O14617 1153 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 TFPIP10646 304 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 DRD4P21917 467 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 EPS8Q12929 822 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 SELPLGQ14242 412 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 CTU2Q2VPK5 515 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 RNF220Q5VTB9 566 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 MEX3BQ6ZN04 569 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 ADGRG7Q96K78 797 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 SPOCK3Q9BQ16 436 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 ECSITQ9BQ95 431 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 TRIM8Q9BZR9 551 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 PIGMQ9H3S5 423 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 KAT8Q9H7Z6 458 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 SLC13A4Q9UKG4 626 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 ANGPT4Q9Y264 503 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 SPENQ96T58 3664 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 NUP214P35658 2090 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 MYO7BQ6PIF6 2116 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
SMARCA4-212ENST00000586985 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 FAAHO00519 579 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 SNX3O60493 162 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 COX4I1P13073 169 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 CCNA2P20248 432 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 SHC1P29353 583 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 PRKAR1BP31321 381 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 UQCRC1P31930 480 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 SLC1A3P43003 542 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 ASCL1P50553 236 aa13.02□□□□□ -0.33
SMARCA4-212ENST00000586985 DLX5P56178 289 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms