RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZNF264O43296 627 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 CHP2O43745 196 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 CYP7B1O75881 506 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 PNMTP11086 282 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 ELAVL4P26378 380 aaKnown RBP11.54□□□□□ -0.56
VMP1-202ENST00000585847 HTR3AP46098 478 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 HLCSP50747 726 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 SSR4P51571 173 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 TEKQ02763 1124 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 MAPK14Q16539 360 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 NTRK2Q16620 822 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 EXOC3L2Q2M3D2 409 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 SLC36A3Q495N2 470 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 FGD3Q5JSP0 725 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 FNDC7Q5VTL7 733 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 RPL13AP3Q6NVV1 102 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 ULK3Q6PHR2 472 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 RRM2BQ7LG56 351 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 OLIG3Q7RTU3 272 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 GALNT4Q8N4A0 578 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 OR10Q1Q8NGQ4 319 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 HGDQ93099 445 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 SGCZQ96LD1 299 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 APOL4Q9BPW4 351 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 FUZQ9BT04 418 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 TEX12Q9BXU0 123 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 HES7Q9BYE0 225 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 YTHDF1Q9BYJ9 559 aaKnown RBP11.54□□□□□ -0.56
VMP1-202ENST00000585847 LAT2Q9GZY6 243 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 QRSL1Q9H0R6 528 aaKnown RBP11.54□□□□□ -0.56
VMP1-202ENST00000585847 PROK2Q9HC23 129 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 PAPOLBQ9NRJ5 636 aaKnown RBP11.54□□□□□ -0.56
VMP1-202ENST00000585847 ABI3Q9P2A4 366 aa11.54□□□□□ -0.56
VMP1-202ENST00000585847 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 SH3PXD2BA1X283 911 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 OR5H15A6NDH6 313 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 PDLIM1O00151 329 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 FFAR1O14842 300 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 NDUFB5O43674 189 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 MPZL2O60487 215 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 EPPINO95925 133 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 CBLP22681 906 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 MYF6P23409 242 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 EVI2BP34910 448 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 PTGDSP41222 190 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 RFX3P48380 749 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ZNF136P52737 540 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 FBXW4P57775 412 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ALDH6A1Q02252 535 aaKnown RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 C17orf67Q0P5P2 114 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 NPTX1Q15818 432 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ENTPD8Q5MY95 495 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 WBP2NLQ6ICG8 309 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ZNF770Q6IQ21 691 aaPredicted RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 IL20RBQ6UXL0 311 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 Q6ZS92 163 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 MDGA2Q7Z553 956 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 CLDN22Q8N7P3 220 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ZNF614Q8N883 585 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 C9orf43Q8TAL5 461 aaPredicted RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 PIGXQ8TBF5 258 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ADAMTS16Q8TE57 1224 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 EFHD2Q96C19 240 aaPredicted RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 SPACA9Q96E40 222 aaPredicted RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 SLC41A3Q96GZ6 507 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ADOQ96SZ5 270 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
VMP1-202ENST00000585847 PNPLA3Q9NST1 481 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 FLRT3Q9NZU0 649 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 RPS6KB2Q9UBS0 482 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 KCNE5Q9UJ90 142 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 CHST2Q9Y4C5 530 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 U3KQV3 271 aa11.53□□□□□ -0.56
VMP1-202ENST00000585847 IGLV3-32A0A0A0MS00 114 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 A0A0B4J2E0 115 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 A0A1B0GX12 115 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 ANKRD33BA6NCL7 494 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 GTPBP1O00178 669 aaKnown RBP11.52□□□□□ -0.57
VMP1-202ENST00000585847 OR10H3O60404 316 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 CDC40O60508 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
VMP1-202ENST00000585847 TNFAIP8O95379 198 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 CYP4B1P13584 511 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 PGCP20142 388 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 TNFRSF1BP20333 461 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 FPR3P25089 353 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 FKBP2P26885 142 aaKnown RBP11.52□□□□□ -0.57
VMP1-202ENST00000585847 TNFSF10P50591 281 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 DLX5P56178 289 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 NUP107P57740 925 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 SKP2Q13309 424 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 PIN1Q13526 163 aaPredicted RBP11.52□□□□□ -0.57
VMP1-202ENST00000585847 CBFBQ13951 182 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 ANKDD1AQ495B1 522 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms