RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 CACNA1CQ13936 2221 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC22A20A6NK97 555 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 NDUFAB1O14561 156 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 MRASO14807 208 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 DNPH1O43598 174 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SERPINB7O75635 380 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 PGM3O95394 542 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 TMIGD3P0DMS9 266 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 PRKAR1BP31321 381 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 STARP49675 285 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 ASCL1P50553 236 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SRYQ05066 204 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SELPLGQ14242 412 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 CAPRIN1Q14444 709 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 MAPK11Q15759 364 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 MAPK14Q16539 360 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SGCBQ16585 318 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 MRPL2Q5T653 305 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 ERICH5Q6P6B1 374 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SEM1Q6ZVN7 128 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 GGNQ86UU5 652 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 OR2V1Q8NHB1 315 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 FBXO27Q8NI29 283 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 RCN3Q96D15 328 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 ADGRG7Q96K78 797 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC39A3Q9BRY0 314 aa12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 THUMPD3Q9BV44 507 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 DNAJB12Q9NXW2 375 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF443Q9Y2A4 671 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-202ENST00000585540 CENPVL1A0A0U1RR11 272 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 A1L4Q6 167 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 CDHR4A6H8M9 788 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 CFAP73A6NFT4 308 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 FXYD1O00168 92 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 EIF1AYO14602 144 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 SEC14L5O43304 696 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 CYP7B1O75881 506 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 TOXO94900 526 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 SYNGR4O95473 234 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 NUDT7P0C024 238 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 COX4I1P13073 169 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 SESN3P58005 492 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 MTPNP58546 118 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 COPZ1P61923 177 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 EPS8Q12929 822 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 SCARB2Q14108 478 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 DHRS4L2Q6PKH6 230 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 UBQLNLQ8IYU4 475 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 LILRA2Q8N149 483 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 ACBD4Q8NC06 268 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 POC1BQ8TC44 478 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 SMPDL3BQ92485 455 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 KAT8Q9H7Z6 458 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 FANCFQ9NPI8 374 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
PRKCSH-202ENST00000585540 HEATR5AQ86XA9 2040 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PCNX3Q9H6A9 2034 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF208O43345 1280 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 GMFGO60234 142 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 TCEA1P23193 301 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PRDX6P30041 224 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC7A1P30825 629 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC1A3P43003 542 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF136P52737 540 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CLDN15P56746 228 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CLDN20P56880 219 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 RNPS1Q15287 305 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CTU2Q2VPK5 515 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF836Q6ZNA1 936 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PLEKHM3Q6ZWE6 761 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PATL1Q86TB9 770 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC43A2Q8N370 569 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 C9orf106Q8NAJ2 232 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 TNIP2Q8NFZ5 429 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 LRRC58Q96CX6 371 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CMTM5Q96DZ9 223 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 REXO5Q96IC2 774 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PINK1Q9BXM7 581 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 ENKD1Q9H0I2 346 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 RNF122Q9H9V4 155 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 KLHL28Q9NXS3 571 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 CHRNA9Q9UGM1 479 aa12.42□□□□□ -0.42
PRKCSH-202ENST00000585540 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms