RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM205BPQ63HN1 556 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MS4A15Q8N5U1 240 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 COX18Q8N8Q8 333 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR4C6Q8NH72 309 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC2A12Q8TD20 617 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DOK4Q8TEW6 326 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SMPDL3BQ92485 455 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 HSD17B8Q92506 261 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GHITMQ9H3K2 345 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NUDT15Q9NV35 164 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 URADA6NGE7 173 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FABP7O15540 132 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RFPL3O75679 317 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF3P17036 446 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SRP9P49458 86 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NRG3P56975 720 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PLAURQ03405 335 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CRMP1Q14194 572 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FCN2Q15485 313 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF613Q6PF04 617 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC44A3Q8N4M1 653 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GHSRQ92847 366 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MED28Q9H204 178 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 KLHL1Q9NR64 748 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FBXL4Q9UKA2 621 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TNFSF14O43557 240 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RAB3BP20337 219 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ACTC1P68032 377 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ACTA1P68133 377 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 KIR2DS3Q14952 304 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TCEA2Q15560 299 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CYB561A3Q8NBI2 242 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SMAP2Q8WU79 429 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FAM131CQ96AQ9 280 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MRPL39Q9NYK5 338 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BAIAP2Q9UQB8 552 aa13.12□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC31A1O15431 190 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BRINP1O60477 761 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LDB3O75112 727 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PEPDP12955 493 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF10P21506 573 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PYCR1P32322 319 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MAP3K8P41279 467 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ANGPT1Q15389 498 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FIGNL1Q6PIW4 674 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SSX6Q7RTT6 188 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LRRC17Q8N6Y2 441 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PMM1Q92871 262 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BADQ92934 168 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 C14orf105Q9NVL8 296 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TRAV1-2A0A0B4J238 106 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF860A6NHJ4 632 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FGF17O60258 216 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 UBL3O95164 117 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 AK1P00568 194 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ADPRHP54922 357 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 POU4F2Q12837 409 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ANKRD54Q6NXT1 300 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RTL4Q6ZR62 310 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ABHD13Q7L211 337 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TTC9Q92623 222 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ARSGQ96EG1 525 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF559Q9BR84 538 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TMEM27Q9HBJ8 222 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC23A1Q9UHI7 598 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ST6GALNAC2Q9UJ37 374 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PILRAQ9UKJ1 303 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NUBP2Q9Y5Y2 271 aa13.11□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3DA0A087WVF3 549 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3IA0A087WXS9 549 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A0B4J2E0 115 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A1B0GX12 115 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 POM121BA6NF01 834 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3LB9A6J9 549 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 HYAL3O43820 417 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TCRBP04435 133 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GYPBP06028 91 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3HP0C7X1 549 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms