RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FOXF1Q12946 379 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 SGCBQ16585 318 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 PLPPR5Q32ZL2 321 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 RINLQ6ZS11 566 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 GRAMD2AQ8IUY3 354 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 CLIP4Q8N3C7 705 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 OR52E4Q8NGH9 312 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 FAM57AQ8TBR7 257 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 SLC35B4Q969S0 331 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 ARSGQ96EG1 525 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 C1orf21Q9H246 121 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 TP63Q9H3D4 680 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 TIGARQ9NQ88 270 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 TNFRSF10DQ9UBN6 386 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 PRPF19Q9UMS4 504 aaKnown RBP12.55□□□□□ -0.4
TRAF4-215ENST00000584944 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 AP4B1Q9Y6B7 739 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
TRAF4-215ENST00000584944 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 A0A1B0GUH1 482 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 C7orf72A4D263 438 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 CLDN1O95832 211 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 LDLRP01130 860 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 C8BP07358 591 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 TFPIP10646 304 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 GABRA1P14867 456 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 PRKCAP17252 672 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 CD247P20963 164 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 CXCR1P25024 350 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 ELK4P28324 431 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 ADH6P28332 368 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 PTGER4P35408 488 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
TRAF4-215ENST00000584944 SESN3P58005 492 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 DMTNQ08495 405 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 EPS8Q12929 822 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 BNIP2Q12982 314 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 GXYLT1Q4G148 440 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 CYBRD1Q53TN4 286 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 VASNQ6EMK4 673 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 WBP2NLQ6ICG8 309 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-215ENST00000584944 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 FAM71CQ8NEG0 241 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-215ENST00000584944 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 LRGUKQ96M69 825 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 TIMP4Q99727 224 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 ZNF559Q9BR84 538 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 THTPAQ9BU02 230 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 TRIM2Q9C040 744 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 SPRR3Q9UBC9 169 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 PACSIN3Q9UKS6 424 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 USP22Q9UPT9 525 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
TRAF4-215ENST00000584944 DIDO1Q9BTC0 2240 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 EML6Q6ZMW3 1958 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SHISA8B8ZZ34 492 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SYT5O00445 386 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 CCL21O00585 134 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 FRS3O43559 492 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 WDR1O75083 606 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SERPINA1P01009 418 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 FESP07332 822 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 HSD17B1P14061 328 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 NCK1P16333 377 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 CCNA2P20248 432 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 FKBP2P26885 142 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 COL8A1P27658 744 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 HTR1EP28566 365 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SFTPDP35247 375 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SLC1A3P43003 542 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 STARP49675 285 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 POLR2HP52434 150 aaKnown RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 GFRA1P56159 465 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 SELENBP1Q13228 472 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TOMM34Q15785 309 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-215ENST00000584944 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 C1QL3Q5VWW1 255 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 GLYATQ6IB77 296 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 FAM156AQ8NDB6 213 aa12.53□□□□□ -0.4
TRAF4-215ENST00000584944 TAMM41Q96BW9 452 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms