RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 ZNF583Q96ND8 569 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 TCEAL2Q9H3H9 227 aaPredicted RBP12.24□□□□□ -0.45
RNF43-208ENST00000584437 PARP4Q9UKK3 1724 aaKnown RBP12.24□□□□□ -0.45
RNF43-208ENST00000584437 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 M0QZQ0 153 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 TOR1AO14656 332 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 EPHA1P21709 976 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 CAV3P56539 151 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 ADARB1P78563 741 aaKnown RBP12.24□□□□□ -0.45
RNF43-208ENST00000584437 OR2G6Q5TZ20 316 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 OR51Q1Q8NH59 317 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 DUSP19Q8WTR2 217 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 ARPC5LQ9BPX5 153 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 EGLN3Q9H6Z9 239 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 DIMT1Q9UNQ2 313 aaKnown RBP12.24□□□□□ -0.45
RNF43-208ENST00000584437 MYH3P11055 1940 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 DRGXA6NNA5 263 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 C5AR1P21730 350 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 CLDN6P56747 220 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 ENTPD8Q5MY95 495 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 MEX3BQ6ZN04 569 aaKnown RBP12.24□□□□□ -0.45
RNF43-208ENST00000584437 OR6T1Q8NGN1 323 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 SGCZQ96LD1 299 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 INIPQ9NRY2 104 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 DZANK1Q9NVP4 752 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 PGAP2Q9UHJ9 254 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 POLHQ9Y253 713 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 ADAM18Q9Y3Q7 739 aa12.24□□□□□ -0.45
RNF43-208ENST00000584437 MYH7P12883 1935 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 NPIPB15A6NHN6 443 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 LALBAP00709 142 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PTHP01270 115 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SLC1A3P43003 542 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 EEF1A1P5Q5VTE0 462 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 FAM180BQ6P0A1 224 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 MRPL41Q8IXM3 137 aaKnown RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 ACVR1CQ8NER5 493 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 OR8J2Q8NGG1 315 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 UBXN10Q96LJ8 280 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CA5BQ9Y2D0 317 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SDC3O75056 442 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 KLF8O95600 359 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 FUCA1P04066 466 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 NOVP48745 357 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 UBE2KP61086 200 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SLC14A1Q13336 389 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 TAZQ16635 292 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 FAM122BQ7Z309 247 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CELF2-AS1Q8N7Q2 184 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 OR5AR1Q8NGP9 310 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SLAMF9Q96A28 289 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SEMA4GQ9NTN9 838 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PTGESO14684 152 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 KCNK2O95069 426 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 TCRBP04435 133 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CD70P32970 193 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 ILKQ13418 452 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PRAMEF8Q5VWM4 474 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PRAMEF7Q5VXH5 474 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 ACOT4Q8N9L9 421 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 THAP3Q8WTV1 239 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 CENPOQ9BU64 300 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SMIM3Q9BZL3 60 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 FBRSQ9HAH7 460 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PIK3C2AO00443 1686 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 E9PI62 339 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 K7EPK0 472 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 FZD9O00144 591 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 TNFRSF10AO00220 468 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 HBE1P02100 147 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 BTG1P62324 171 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 PLA2G7Q13093 441 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 IDO2Q6ZQW0 420 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 LSMEM2Q8N112 164 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 BTBD2Q9BX70 525 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 QRSL1Q9H0R6 528 aaKnown RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 NTN4Q9HB63 628 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 SLAMF8Q9P0V8 285 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 GPR34Q9UPC5 381 aa12.23□□□□□ -0.45
RNF43-208ENST00000584437 ZNF443Q9Y2A4 671 aaPredicted RBP12.23□□□□□ -0.45
RNF43-208ENST00000584437 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
RNF43-208ENST00000584437 LCATP04180 440 aa12.22□□□□□ -0.45
RNF43-208ENST00000584437 S100A11P31949 105 aa12.22□□□□□ -0.45
RNF43-208ENST00000584437 MBTPS1Q14703 1052 aa12.22□□□□□ -0.45
RNF43-208ENST00000584437 NSDHLQ15738 373 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms