RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TRAPPC13A5PLN9 417 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 HTR3EA5X5Y0 456 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 TRIM64CA6NLI5 447 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 CLDN24A6NM45 220 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ABCB7O75027 752 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 MITFO75030 526 aaPredicted RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 STK17BO94768 372 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 LYPD3O95274 346 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 GSTM3P21266 225 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 FUT4P22083 530 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 STAT5AP42229 794 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ACAA2P42765 397 aaKnown RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 SLC26A5P58743 744 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 TAS2R41P59536 307 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 CXCR4P61073 352 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 TEKQ02763 1124 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 SEC23BQ15437 767 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 PDZK1Q5T2W1 519 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 KRT80Q6KB66 452 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 PGBD2Q6P3X8 592 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 PAPD4Q6PIY7 484 aaKnown RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 C6orf15Q6UXA7 325 aaPredicted RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 GDF7Q7Z4P5 450 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ZER1Q7Z7L7 766 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 PRSS58Q8IYP2 241 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 C8orf59Q8N0T1 100 aaPredicted RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 ARMC10Q8N2F6 343 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 SETD9Q8NE22 299 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ADAMTS16Q8TE57 1224 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ACOT11Q8WXI4 607 aaPredicted RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 CNOT9Q92600 299 aaKnown RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 SLC41A3Q96GZ6 507 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 IMMP1LQ96LU5 166 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ZNF700Q9H0M5 742 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 DNAJB12Q9NXW2 375 aaKnown RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 KIF17Q9P2E2 1029 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 RHCGQ9UBD6 479 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 REV1Q9UBZ9 1251 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 ZNF223Q9UK11 482 aaPredicted RBP10.93□□□□□ -0.66
GGA3-217ENST00000583667 MYRFQ9Y2G1 1151 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 PCDHGB5Q9Y5G0 923 aa10.93□□□□□ -0.66
GGA3-217ENST00000583667 OR6C70A6NIJ9 312 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 PRSS44E7EML9 344 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 ZFAND5O76080 213 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 THY1P04216 161 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 UMODP07911 640 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 UBTFL6P0CB48 400 aaPredicted RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 OSMP13725 252 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 POLR2IP36954 125 aaKnown RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 CLK3P49761 638 aaKnown RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 CSNK2BP67870 215 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 RPP38P78345 283 aaKnown RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 TOP3AQ13472 1001 aaPredicted RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 EFR3AQ14156 821 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 LINC00114Q6XXX2 140 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 SHISA6Q6ZSJ9 500 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 HMGN2P46Q86SG4 172 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 SLC15A4Q8N697 577 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 AQP11Q8NBQ7 271 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 OR4K5Q8NGD3 323 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 M1APQ8TC57 530 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 ELP5Q8TE02 316 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 RNF138Q8WVD3 245 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 HDAC2Q92769 488 aaKnown RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 MPP4Q96JB8 637 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 HS6ST2Q96MM7 605 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 APOL4Q9BPW4 351 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 NIPSNAP1Q9BPW8 284 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 PRSS27Q9BQR3 290 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 ZNF426Q9BUY5 554 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 TMEM27Q9HBJ8 222 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 TUBA8Q9NY65 449 aaPredicted RBP10.92□□□□□ -0.66
GGA3-217ENST00000583667 CCDC88CQ9P219 2028 aa10.92□□□□□ -0.66
GGA3-217ENST00000583667 NPIPA5A0A0B4J1W7 369 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 ANKUB1A6NFN9 424 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 TMEM200CA6NKL6 621 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 ZAR1LA6NP61 321 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 ALG1L2C9J202 215 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 NPIPA7E9PJI5 369 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 BCKDKO14874 412 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 KLF4O43474 513 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 FRS3O43559 492 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 OR10H3O60404 316 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
GGA3-217ENST00000583667 UTS2O95399 124 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 IGF2P01344 180 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 CCDC159P0C7I6 412 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 NPIPA8P0DM63 369 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 PRG2P13727 222 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 MMP11P24347 488 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 ITGA3P26006 1051 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 HTR2AP28223 471 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 ABCD3P28288 659 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 KRT20P35900 424 aa10.91□□□□□ -0.66
GGA3-217ENST00000583667 GGT2P36268 569 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms