RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 LINGO3P0C6S8 592 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 FAM157CP0CG43 387 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 ACP2P11117 423 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 HPGDP15428 266 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 ELK4P28324 431 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 LCN1P31025 176 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 GPC1P35052 558 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 SFTPDP35247 375 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 EIF1P41567 113 aaKnown RBP12.03□□□□□ -0.48
SS18-222ENST00000582792 PRIM2P49643 509 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
SS18-222ENST00000582792 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
SS18-222ENST00000582792 ITGADQ13349 1161 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 PDE7AQ13946 482 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 IL23RQ5VWK5 629 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 MAVSQ7Z434 540 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 CEP70Q8NHQ1 597 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 B4GALNT2Q8NHY0 566 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 GIMAP5Q96F15 307 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 CCDC28BQ9BUN5 200 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 REEP4Q9H6H4 257 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 UBQLN4Q9NRR5 601 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 NTMQ9P121 344 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 ATP6V1HQ9UI12 483 aa12.03□□□□□ -0.48
SS18-222ENST00000582792 ANK2Q01484 3957 aa12.02□□□□□ -0.48
SS18-222ENST00000582792 IGHV4-30-2A0A087WSY4 118 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 A0A096LNT2 108 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 ZNF814B7Z6K7 855 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 SCDO00767 359 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 PDPK1O15530 556 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 GPRIN2O60269 458 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 PRKD3O94806 890 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 YES1P07947 543 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 PRPS1L1P21108 318 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 PRKAG1P54619 331 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 CLDN8P56748 225 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 GUCY1A3Q02108 690 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 FOXF1Q12946 379 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 CD226Q15762 336 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 NRF1Q16656 503 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 DUSP5Q16690 384 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 C6orf52Q5T4I8 152 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 FCRLAQ7L513 359 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 BHLHA15Q7RTS1 189 aaPredicted RBP12.02□□□□□ -0.49
SS18-222ENST00000582792 SLC16A11Q8NCK7 471 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 NUP43Q8NFH3 380 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 FBXO30Q8TB52 745 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 CIDECQ96AQ7 238 aaPredicted RBP12.02□□□□□ -0.49
SS18-222ENST00000582792 MS4A4EQ96PG1 132 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 TSSK3Q96PN8 268 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 FAIMQ9NVQ4 179 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
SS18-222ENST00000582792 GIMAP2Q9UG22 337 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
SS18-222ENST00000582792 GJE1A6NN92 205 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 SHISA9B4DS77 424 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 EFNA2O43921 213 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 SSX4O60224 188 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 RAMP1O60894 148 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 G6PDP11413 515 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 EPHA3P29320 983 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 HPCAL1P37235 193 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
SS18-222ENST00000582792 GSTA3Q16772 222 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 SLC9B1Q4ZJI4 515 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 ZNF385BQ569K4 471 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 ANKRD26P1Q6NSI1 321 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 Q6ZT83 130 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
SS18-222ENST00000582792 SZRD1Q7Z422 152 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 RIMKLAQ8IXN7 391 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 SLC43A2Q8N370 569 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 ZFP28Q8NHY6 868 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
SS18-222ENST00000582792 C1orf50Q9BV19 199 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 WDR55Q9H6Y2 383 aaPredicted RBP12.01□□□□□ -0.49
SS18-222ENST00000582792 COQ10BQ9H8M1 238 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 AIG1Q9NVV5 245 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 B3GALT5Q9Y2C3 310 aa12.01□□□□□ -0.49
SS18-222ENST00000582792 SCAMP2O15127 329 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 LYZL6O75951 148 aa12□□□□□ -0.49
SS18-222ENST00000582792 ALOX5P09917 674 aa12□□□□□ -0.49
SS18-222ENST00000582792 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
SS18-222ENST00000582792 IDO1P14902 403 aa12□□□□□ -0.49
SS18-222ENST00000582792 FRKP42685 505 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 OR3A2P47893 321 aa12□□□□□ -0.49
SS18-222ENST00000582792 IDH3AP50213 366 aa12□□□□□ -0.49
SS18-222ENST00000582792 NUDT6P53370 316 aa12□□□□□ -0.49
SS18-222ENST00000582792 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 AQP5P55064 265 aa12□□□□□ -0.49
SS18-222ENST00000582792 CDH11P55287 796 aa12□□□□□ -0.49
SS18-222ENST00000582792 ZNF117Q03924 483 aa12□□□□□ -0.49
SS18-222ENST00000582792 MLC1Q15049 377 aa12□□□□□ -0.49
SS18-222ENST00000582792 PPA1Q15181 289 aa12□□□□□ -0.49
SS18-222ENST00000582792 STK11Q15831 433 aa12□□□□□ -0.49
SS18-222ENST00000582792 DPY19L1Q2PZI1 675 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms