RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ONECUT1Q9UBC0 465 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 WARS2Q9UGM6 360 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 PRO0461Q9UI25 63 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 UBQLN1Q9UMX0 589 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 ABCG2Q9UNQ0 655 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 SCML2Q9UQR0 700 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 PLLPQ9Y342 182 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 ATRXP46100 2492 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 CROCCQ5TZA2 2017 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 LRP5LA4QPB2 252 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 PRKYO43930 277 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 HCN1O60741 890 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 LYPLA1O75608 230 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 GNA14O95837 355 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 GCFC2P16383 781 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 POLR2EP19388 210 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 P2RY1P47900 373 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 PRKXP51817 358 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 HSPA2P54652 639 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 STX17P56962 302 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 RIPK4P57078 832 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 KYAT1Q16773 422 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 TRIM16LQ309B1 348 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 TMEM225Q6GV28 225 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF544Q6NX49 715 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 CCDC137Q6PK04 289 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 TFAP2EQ6VUC0 442 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 PPP1R42Q7Z4L9 355 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 VASH2Q86V25 355 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 C17orf82Q86X59 251 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 DHRSXQ8N5I4 330 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ATP6V0D2Q8N8Y2 350 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 OR4D5Q8NGN0 318 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC5A11Q8WWX8 675 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 FAM122AQ96E09 287 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 MAGEB18Q96M61 343 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 TGM7Q96PF1 710 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF184Q99676 751 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 SRXN1Q9BYN0 137 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 RHBGQ9H310 441 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 EHD1Q9H4M9 534 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF385DQ9H6B1 395 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 GORASP2Q9H8Y8 452 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 PLSCR3Q9NRY6 295 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 B3GNT2Q9NY97 397 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 TMEM9Q9P0T7 183 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 RPH3ALQ9UNE2 315 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ERVW-1Q9UQF0 538 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 KDRP35968 1356 aa3.36□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF646O15015 1829 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 VSTM2BA6NLU5 285 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 KLLNB2CW77 178 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 E7ESA3 106 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 ARPC3O15145 178 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 N4BP1O75113 896 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 MTX2O75431 263 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 RHOBTB1O94844 696 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 LYPD3O95274 346 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 SEMG1P04279 462 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 PNMTP11086 282 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 LAP3P28838 519 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 NMT1P30419 496 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 NTSP30990 170 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 HNMTP50135 292 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 ARFIP1P53367 373 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 SPIBQ01892 262 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 RSBN1Q5VWQ0 802 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 HSD17B13Q7Z5P4 300 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 TMEM179BQ7Z7N9 219 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF589Q86UQ0 364 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 LCA5Q86VQ0 697 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 NRMQ8IXM6 262 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 CLEC4FQ8N1N0 589 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 OR52M1Q8NGK5 317 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 OR1F12Q8NHA8 337 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF564Q8TBZ8 553 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 TCTEX1D2Q8WW35 142 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 B3GALT6Q96L58 329 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 ISG20L2Q9H9L3 353 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 IL17CQ9P0M4 197 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 PCSK1NQ9UHG2 260 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 PTBP2Q9UKA9 531 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 MEMO1Q9Y316 297 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 TNRQ92752 1358 aa3.35□□□□□ -1.87
SMCHD1-205ENST00000581383 IGHV1OR15-1A0A075B7D0 117 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 C15orf38-AP3S2A0A0A6YYH1 394 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 IGHV7-81A0A0B4J1V7 117 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 K7N7A8 449 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SLITRK3O94933 977 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 LALBAP00709 142 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 RNH1P13489 461 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 CD1EP15812 388 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 GLRA2P23416 452 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 MMP11P24347 488 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms