RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 QRSL1Q9H0R6 528 aaKnown RBP16.76■□□□□ 0.27
NDEL1-209ENST00000580738 CDC42EP4Q9H3Q1 356 aaKnown RBP16.76■□□□□ 0.27
NDEL1-209ENST00000580738 TNFRSF12AQ9NP84 129 aa16.76■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF180Q9UJW8 692 aa16.76■□□□□ 0.27
NDEL1-209ENST00000580738 CCL27Q9Y4X3 112 aa16.76■□□□□ 0.27
NDEL1-209ENST00000580738 MGAM2Q2M2H8 2515 aa16.76■□□□□ 0.27
NDEL1-209ENST00000580738 ESPNB1AK53 854 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 NPIPB8E9PQR5 432 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 KCNAB3O43448 404 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 SEC22BO75396 215 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 RSL1D1O76021 490 aaKnown RBP16.75■□□□□ 0.27
NDEL1-209ENST00000580738 HSPA4LO95757 839 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 HMGN2P05204 90 aaKnown RBP16.75■□□□□ 0.27
NDEL1-209ENST00000580738 DIO1P49895 249 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 SWI5Q1ZZU3 235 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 IQCCQ4KMZ1 466 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 CDC73Q6P1J9 531 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 ZCCHC12Q6PEW1 402 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 SLC22A9Q8IVM8 553 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 CCNYL1Q8N7R7 359 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 WDR31Q8NA23 367 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF527Q8NB42 609 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 APH1AQ96BI3 265 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 PPCDCQ96CD2 204 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 FBXO17Q96EF6 278 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 MUS81Q96NY9 551 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 IQCGQ9H095 443 aaKnown RBP16.75■□□□□ 0.27
NDEL1-209ENST00000580738 DUSP22Q9NRW4 184 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 ASB6Q9NWX5 421 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 TAS2R16Q9NYV7 291 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 SH3BP4Q9P0V3 963 aa16.75■□□□□ 0.27
NDEL1-209ENST00000580738 IGKV3D-15A0A087WSY6 115 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ATP6V1G2-DDX39BF2Z307 99 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 H3BNH8 94 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ETV2O00321 342 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 SNRPAP09012 282 aaKnown RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF23P17027 643 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ATP6V1C1P21283 382 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 PHC1P78364 1004 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 LASP1Q14847 261 aaKnown RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 TIGD2Q4W5G0 525 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ABLIM2Q6H8Q1 611 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 C3orf33Q6P1S2 294 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 RELL1Q8IUW5 271 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 TMCO5AQ8N6Q1 288 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ANKS4BQ8N8V4 417 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 OR5W2Q8NH69 310 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 FAM120BQ96EK7 910 aaKnown RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF764Q96H86 408 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 TRMOQ9BU70 441 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 HOXD1Q9GZZ0 328 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 PIGUQ9H490 435 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 REEP4Q9H6H4 257 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 FKRPQ9H9S5 495 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 RRAGDQ9NQL2 400 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 SIRT3Q9NTG7 399 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ACSS1Q9NUB1 689 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 EMC3Q9P0I2 261 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 NOSIPQ9Y314 301 aaKnown RBP16.74■□□□□ 0.27
NDEL1-209ENST00000580738 PTGDR2Q9Y5Y4 395 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 KCNE3Q9Y6H6 103 aa16.74■□□□□ 0.27
NDEL1-209ENST00000580738 ARFGEF3Q5TH69 2177 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 LOC390937A0A1W2PQ73 354 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 LRP5LA4QPB2 252 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF716A6NP11 495 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 ITGA5P08648 1049 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 CCR4P51679 360 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 SLC25A3Q00325 362 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 C9orf135Q5VTT2 229 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 OR7E24Q6IFN5 339 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 TMPPEQ6ZT21 453 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF614Q8N883 585 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 OR52E4Q8NGH9 312 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 CLHC1Q8NHS4 586 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 TSSK3Q96PN8 268 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 STACQ99469 402 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 BPESC1Q9GZL8 116 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 ZCCHC3Q9NUD5 404 aaKnown RBP16.73■□□□□ 0.27
NDEL1-209ENST00000580738 BAIAP2L1Q9UHR4 511 aa16.73■□□□□ 0.27
NDEL1-209ENST00000580738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
NDEL1-209ENST00000580738 NPIPB9F8W1W9 429 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 SULT2B1O00204 365 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 TBX19O60806 448 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 SDC1P18827 310 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 ATP12AP54707 1039 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 PDE7AQ13946 482 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 PDK3Q15120 406 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 DCST2Q5T1A1 773 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
NDEL1-209ENST00000580738 TOR1AIP2Q8NFQ8 470 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 DNAJA3Q96EY1 480 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 MALT1Q9UDY8 824 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 MOKQ9UQ07 419 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 DTNAQ9Y4J8 743 aa16.72■□□□□ 0.27
NDEL1-209ENST00000580738 ZNF264O43296 627 aa16.71■□□□□ 0.27
NDEL1-209ENST00000580738 EGR1P18146 543 aa16.71■□□□□ 0.27
NDEL1-209ENST00000580738 SRP14P37108 136 aaKnown RBP16.71■□□□□ 0.27
NDEL1-209ENST00000580738 CBFBQ13951 182 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms