RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 NPSR1Q6W5P4 371 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 VASH1Q7L8A9 365 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 ZNF550Q7Z398 422 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 GDF7Q7Z4P5 450 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 HMGN2P46Q86SG4 172 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 MRGPREQ86SM8 312 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 TMEM151BQ8IW70 566 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 ZNF440Q8IYI8 595 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 METTL27Q8N6F8 245 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 PLPP5Q8NEB5 264 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 OR8J1Q8NGP2 316 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 C9orf43Q8TAL5 461 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 PTPMT1Q8WUK0 201 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 DAZLQ92904 295 aaKnown RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 ZNF775Q96BV0 537 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 SENP5Q96HI0 755 aaPredicted RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 HS6ST2Q96MM7 605 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 RASSF1Q9NS23 344 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 CLN6Q9NWW5 311 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 SIDT1Q9NXL6 827 aaKnown RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 DHCR7Q9UBM7 475 aaKnown RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 MRTO4Q9UKD2 239 aaKnown RBP9.03□□□□□ -0.96
SNX11-206ENST00000580219 CBLCQ9ULV8 474 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 TMEM5Q9Y2B1 443 aa9.03□□□□□ -0.96
SNX11-206ENST00000580219 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.96
SNX11-206ENST00000580219 IGHV5-10-1A0A0J9YXX1 117 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CENPVL1A0A0U1RR11 272 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 FRG2CA6NGY1 282 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TRIM64BA6NI03 449 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 EFCAB7A8K855 629 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ZNF99A8MXY4 864 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 H3BN98 237 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 HRKO00198 91 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 KLF4O43474 513 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 FRS3O43559 492 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 AHCYL1O43865 530 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 MT-CO3P00414 261 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TP53P04637 393 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 PRF1P14222 555 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ADH7P40394 386 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 RBM34P42696 430 aaKnown RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 SMSP52788 366 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 SLC37A1P57057 533 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CDK5Q00535 292 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ZFP36L1Q07352 338 aaKnown RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 LSAMPQ13449 338 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 FGFBP1Q14512 234 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 OR1Q1Q15612 314 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TBCEQ15813 527 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 OCLNQ16625 522 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TBR1Q16650 682 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 MINDY4Q4G0A6 757 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 SYT6Q5T7P8 510 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 CDCP2Q5VXM1 449 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 MEDAGQ5VYS4 303 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CASP12Q6UXS9 341 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 Q6ZPB1 254 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 PTCHD4Q6ZW05 846 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CLVS1Q8IUQ0 354 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 ERI1Q8IV48 349 aaKnown RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 CCDC103Q8IW40 242 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 LSMEM1Q8N8F7 131 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 RCBTB1Q8NDN9 531 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TEX47Q8TBZ9 253 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 DOK4Q8TEW6 326 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 RAB2BQ8WUD1 216 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 RORBQ92753 470 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 OSTF1Q92882 214 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ISOC1Q96CN7 298 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 MPP4Q96JB8 637 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CCDC74BQ96LY2 380 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 COPS4Q9BT78 406 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 YIPF2Q9BWQ6 316 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ITPAQ9BY32 194 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 POLDIP3Q9BY77 421 aaKnown RBP9.02□□□□□ -0.97
SNX11-206ENST00000580219 TRIM2Q9C040 744 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 SLC7A5P2Q9GIP4 190 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 TMEM27Q9HBJ8 222 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 FBXO34Q9NWN3 711 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ERVK-18Q9QC07 812 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 RARRES3Q9UL19 164 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 SLC35A3Q9Y2D2 325 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 OR10H1Q9Y4A9 318 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 CLCA3PQ9Y6N3 262 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ESPL1Q14674 2120 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 KIF26BQ2KJY2 2108 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.97
SNX11-206ENST00000580219 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
SNX11-206ENST00000580219 HTR3EA5X5Y0 456 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 CLDN24A6NM45 220 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 VGLL3A8MV65 326 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 TO15178 435 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 CHP2O43745 196 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
SNX11-206ENST00000580219 LYPD3O95274 346 aa9.01□□□□□ -0.97
SNX11-206ENST00000580219 IL33O95760 270 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms