RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 DEPPQ9NTK1 212 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 TUBA8Q9NY65 449 aaPredicted RBP9.77□□□□□ -0.85
SS18-213ENST00000579640 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 B4GALT7Q9UBV7 327 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 TMCC3Q9ULS5 477 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 SLC7A7Q9UM01 511 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 CHD8Q9HCK8 2581 aa9.77□□□□□ -0.85
SS18-213ENST00000579640 EML6Q6ZMW3 1958 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 A0A0G2JMM0 328 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 A0A1W2PPB8 328 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 A0A1W2PRS3 328 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 KIR3DP1A8MWS1 328 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 ZNF23P17027 643 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 EIF1P41567 113 aaKnown RBP9.76□□□□□ -0.85
SS18-213ENST00000579640 SESN3P58005 492 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 GPR85P60893 370 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 FOXO1Q12778 655 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 TRIP10Q15642 601 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 INPP5JQ15735 1006 aaPredicted RBP9.76□□□□□ -0.85
SS18-213ENST00000579640 SNCBQ16143 134 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 GLYR1Q49A26 553 aaPredicted RBP9.76□□□□□ -0.85
SS18-213ENST00000579640 SLC25A53Q5H9E4 307 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 FGD3Q5JSP0 725 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 GALNTL5Q7Z4T8 443 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 ZDHHC13Q8IUH4 622 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 ICA1LQ8NDH6 482 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 CATSPER1Q8NEC5 780 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 EXTL1Q92935 676 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 ZBTB8AQ96BR9 441 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 MRGPRX4Q96LA9 322 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 HS6ST2Q96MM7 605 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 C9orf16Q9BUW7 83 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 KLHL1Q9NR64 748 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 MAN2C1Q9NTJ4 1040 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 MED17Q9NVC6 651 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 VNN3Q9NY84 501 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 TUBD1Q9UJT1 453 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 FBXL2Q9UKC9 423 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 C15orf41Q9Y2V0 281 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 MRPS18CQ9Y3D5 142 aaKnown RBP9.76□□□□□ -0.85
SS18-213ENST00000579640 FREM2Q5SZK8 3169 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 IGF2RP11717 2491 aa9.76□□□□□ -0.85
SS18-213ENST00000579640 C7orf72A4D263 438 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ARRDC5A6NEK1 342 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 LRRC3CA6NJW4 275 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 B4DXG7 233 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 G3V2T6 193 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 GMFGO60234 142 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 CCNB2O95067 398 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 LYPD3O95274 346 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 THY1P04216 161 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 PRKCAP17252 672 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 DPP4P27487 766 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ADH6P28332 368 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 SRD5A2P31213 254 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 RBM34P42696 430 aaKnown RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 MEOX1P50221 254 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 POLR2HP52434 150 aaKnown RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 MAP2K6P52564 334 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 TOMM34Q15785 309 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 EXOC3L2Q2M3D2 409 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 HYAL4Q2M3T9 481 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 PLPPR5Q32ZL2 321 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ATG4DQ86TL0 474 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 ZFP62Q8NB50 900 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 OR52J3Q8NH60 311 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 SLC7A13Q8TCU3 470 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ACOT11Q8WXI4 607 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 EME1Q96AY2 570 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ABHD17AQ96GS6 310 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 GNRHR2Q96P88 292 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 PSD2Q9BQI7 771 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 PRSS27Q9BQR3 290 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 FUZQ9BT04 418 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 HES7Q9BYE0 225 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ADNPQ9H2P0 1102 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 VCX3BQ9H321 246 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 QPCTLQ9NXS2 382 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 DKKL1Q9UK85 242 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 OAZ3Q9UMX2 235 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 U3KQV3 271 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 PTPRQQ9UMZ3 2332 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 CNTRLQ7Z7A1 2325 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 A0A087WUJ7 227 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 TRBV4-1A0A0J9YWV2 114 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 SAC3D1A6NKF1 404 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 MST1P26927 711 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 TACR3P29371 465 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 GCKP35557 465 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 IFNGR2P38484 337 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 APOBEC1P41238 236 aaKnown RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 IST1P53990 364 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ZNF169Q14929 603 aaPredicted RBP9.75□□□□□ -0.85
SS18-213ENST00000579640 MICAQ29983 383 aa9.75□□□□□ -0.85
SS18-213ENST00000579640 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms