RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 OR10A4Q9H209 315 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC38A1Q9H2H9 487 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 NELFAQ9H3P2 528 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 PTGES2Q9H7Z7 377 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 AKTIPQ9H8T0 292 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 SEC61A2Q9H9S3 476 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 PRM3Q9NNZ6 103 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 SDHAF3Q9NRP4 125 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 GIMAP4Q9NUV9 329 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 ASIC5Q9NY37 505 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF226Q9NYT6 803 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 SENP1Q9P0U3 644 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 NDRG3Q9UGV2 375 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 MKLN1Q9UL63 735 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 LAMP3Q9UQV4 416 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 EIF3LQ9Y262 564 aaKnown RBP3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 B3GALT5Q9Y2C3 310 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 GPR52Q9Y2T5 361 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 DTNAQ9Y4J8 743 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC25A15Q9Y619 301 aa3.92□□□□□ -1.78
PPP4R1-209ENST00000578329 A0A1W2PR80 420 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF503-AS2A6NEH8 195 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TTC36A6NLP5 189 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 H3BQF6 201 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 HMGN4O00479 90 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SDHDO14521 159 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CASKO14936 926 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 FZD7O75084 574 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 IGHV3-9P01782 118 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 FESP07332 822 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 YES1P07947 543 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GUSBP08236 651 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 OR12D1P0DN82 309 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 NEFHP12036 1026 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 FCGR2AP12318 317 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PRG2P13727 222 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PPP3CBP16298 524 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 FPR1P21462 350 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ACAA2P42765 397 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 KCNJ5P48544 419 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SERPINB4P48594 390 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CCT5P48643 541 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 DIO1P49895 249 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC16A1P53985 500 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SUMO3P55854 103 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ATP5J2P56134 94 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 EEFSECP57772 596 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 RAC3P60763 192 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 EMX2Q04743 252 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CHRNEQ04844 493 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TP53BP2Q13625 1128 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 FGFBP1Q14512 234 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GABRA6Q16445 453 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SYPL1Q16563 259 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SGCBQ16585 318 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ARHGAP11BQ3KRB8 267 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GTDC1Q4AE62 458 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TIGD2Q4W5G0 525 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SPANXN4Q5MJ08 99 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 Q6ZT83 130 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CXXC5Q7LFL8 322 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 MTERF4Q7Z6M4 381 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PHC2Q8IXK0 858 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 DDIASQ8IXT1 998 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CEP112Q8N8E3 955 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ANKFN1Q8N957 763 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ATP6V1C2Q8NEY4 427 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 OR8J2Q8NGG1 315 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 OR52E4Q8NGH9 312 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 KIF18AQ8NI77 898 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PHOSPHO1Q8TCT1 267 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SFXN5Q8TD22 340 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ZFP90Q8TF47 636 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SMAP2Q8WU79 429 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 UBLCP1Q8WVY7 318 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 VPS33AQ96AX1 596 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 LRRC46Q96FV0 321 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PPP1R36Q96LQ0 422 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 MUS81Q96NY9 551 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TRMOQ9BU70 441 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 THUMPD3Q9BV44 507 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 DUSP26Q9BV47 211 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TMEM109Q9BVC6 243 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 REG4Q9BYZ8 158 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 NMUR2Q9GZQ4 415 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 LAT2Q9GZY6 243 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 OR51I1Q9H343 314 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GP6Q9HCN6 339 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC52A3Q9NQ40 469 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 CTPS2Q9NRF8 586 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GLRX2Q9NS18 164 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC7A10Q9NS82 523 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 ACER3Q9NUN7 267 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 PNPOQ9NVS9 261 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 RLIMQ9NVW2 624 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 LIPT1Q9Y234 373 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 TMED5Q9Y3A6 229 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 RNF115Q9Y4L5 304 aa3.91□□□□□ -1.78
PPP4R1-209ENST00000578329 GPC6Q9Y625 555 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms