RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAAHO00519 579 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ZNF264O43296 627 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ANGPTL1O95841 491 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 WDPCPO95876 746 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CSTAP01040 98 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 IFNW1P05000 195 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 NPIPA8P0DM63 369 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 FCGR1AP12314 374 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 RHCEP18577 417 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CASRP41180 1078 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PTGDSP41222 190 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 HMGA2P52926 109 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 TUBA3CQ13748 450 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 TUBA3EQ6PEY2 450 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 BORAQ6PGQ7 559 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 IGFL3Q6UXB1 125 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ZNF836Q6ZNA1 936 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 TSEN54Q7Z6J9 526 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 COMTD1Q86VU5 262 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CYP4Z2PQ8N1L4 340 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 LSMEM1Q8N8F7 131 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 TOR1AIP2Q8NFQ8 470 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PHF10Q8WUB8 498 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 NR4A3Q92570 626 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 STMN2Q93045 179 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ARSGQ96EG1 525 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 SLC47A1Q96FL8 570 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 Q96M66 194 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 SEPHS2Q99611 448 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 RTN4RQ9BZR6 473 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 POLR2J2Q9GZM3 115 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 POLR2J3Q9H1A7 115 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 PROK2Q9HC23 129 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ACAD8Q9UKU7 415 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 AURKCQ9UQB9 309 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PCDHGB6Q9Y5F9 930 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ENPP4Q9Y6X5 453 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR5H15A6NDH6 313 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 A6NL46 340 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 GTPBP1O00178 669 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 SEMA7AO75326 666 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PRSS23O95084 383 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 FABP3P05413 133 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 UBL4AP11441 157 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CNR1P21554 472 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ITPKBP27987 946 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ACAA2P42765 397 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 GATA4P43694 442 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR1E2P47887 323 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 SLC6A8P48029 635 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ZNF136P52737 540 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 SUMO3P55854 103 aaPredicted RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 VLDLRP98155 873 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OC90Q02509 493 aaPredicted RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 GK3PQ14409 553 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CD226Q15762 336 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 LINC00696Q6ZRV3 163 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 MDGA2Q7Z553 956 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 MARCH3Q86UD3 253 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CARM1Q86X55 608 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR4D11Q8NGI4 311 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR6T1Q8NGN1 323 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR5M3Q8NGP4 307 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR10Q1Q8NGQ4 319 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 OR5W2Q8NH69 310 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PHOSPHO1Q8TCT1 267 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 DUSP19Q8WTR2 217 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PYDC1Q8WXC3 89 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CNOT9Q92600 299 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 ZNF300Q96RE9 604 aaPredicted RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 WFDC6Q9BQY6 131 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 METTL7AQ9H8H3 244 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 STX18Q9P2W9 335 aaKnown RBP7.3□□□□□ -1.24
COPS3-215ENST00000578317 ICAM5Q9UMF0 924 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CCDC88CQ9P219 2028 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 ETV2O00321 342 aaPredicted RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 TPST2O60704 377 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 BCAS1O75363 584 aaPredicted RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 KRT36O76013 467 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 P04436 131 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 CD3EP07766 207 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 FAM87AP0C7U9 286 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 CCL3P10147 92 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 THRBP10828 461 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 FASP25445 335 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 ERFP50548 548 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 TNFSF10P50591 281 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 P2RX1P51575 399 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 DLX5P56178 289 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 SKP2Q13309 424 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 OR1C1Q15619 314 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 NPTX1Q15818 432 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 SPINK14Q6IE38 97 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 SLC25A25Q6KCM7 469 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 HMGN2P46Q86SG4 172 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 RBM45Q8IUH3 476 aaKnown RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 LACC1Q8IV20 430 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 ZDHHC21Q8IVQ6 265 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms