RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 KHKP50053 298 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 SESN3P58005 492 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 TSC22D1Q15714 1073 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 DPY19L1Q2PZI1 675 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 CROCCP2Q86T23 111 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 RNF130Q86XS8 419 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 KIRREL3Q8IZU9 778 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 VPS37AQ8NEZ2 397 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 GSX1Q9H4S2 264 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 SLC6A13Q9NSD5 602 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 THAP1Q9NVV9 213 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-204ENST00000577497 ACANP16112 2415 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 GJE1A6NN92 205 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 PGRP06401 933 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 CHRM4P08173 479 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 SLC7A1P30825 629 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 CHRNEQ04844 493 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 SYPL1Q16563 259 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 GPAT3Q53EU6 434 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 COX20Q5RI15 118 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 C3orf33Q6P1S2 294 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 DNAJC14Q6Y2X3 702 aaPredicted RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 BEND4Q6ZU67 534 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 ZNF619Q8N2I2 560 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 DNAJA3Q96EY1 480 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 REXO5Q96IC2 774 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 OR5B2Q96R09 309 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 OR52E6Q96RD3 313 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 PANX1Q96RD7 426 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 TMBIM4Q9HC24 238 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 TIGARQ9NQ88 270 aa12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 FLNAP21333 2647 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-204ENST00000577497 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 PRKD3O94806 890 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 AGR2O95994 175 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 PLAUP00749 431 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 PABPC4LP0CB38 370 aaKnown RBP12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 RYKP34925 604 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 RAC3P60763 192 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 MERTKQ12866 999 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 ACKR1Q16570 336 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 TMEM201Q5SNT2 666 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 AP1ARQ63HQ0 302 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 GTF2IRD2BQ6EKJ0 949 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 PLEKHM3Q6ZWE6 761 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 SPATA19Q7Z5L4 167 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 GTF2IRD2Q86UP8 949 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 WFDC8Q8IUA0 241 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 ST8SIA1Q92185 356 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 ZNF300Q96RE9 604 aaPredicted RBP12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 CCDC106Q9BWC9 280 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 POLE3Q9NRF9 147 aa12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 BEX4Q9NWD9 120 aaPredicted RBP12.07□□□□□ -0.48
CUEDC1-204ENST00000577497 TRPC5OSA6NMA1 111 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 ZNF814B7Z6K7 855 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 AP3D1O14617 1153 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 YES1P07947 543 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 GUSBP08236 651 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 PPP3CBP16298 524 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 PGCP20142 388 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 PSMB1P20618 241 aaKnown RBP12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 DIO1P49895 249 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 MVDP53602 400 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 SLC18A1P54219 525 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 KCNJ10P78508 379 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 MAPK11Q15759 364 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 GTDC1Q4AE62 458 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 SYT14P1Q58G82 188 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 NXNQ6DKJ4 435 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 ZNF621Q6ZSS3 439 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 STK32CQ86UX6 486 aa12.06□□□□□ -0.48
CUEDC1-204ENST00000577497 OR9I1Q8NGQ6 314 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms