RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 TSPAN15O95858 294 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 GP1BBP13224 206 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRLHRP49683 370 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 LTBQ06643 244 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF529Q6P280 563 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF585AQ6P3V2 769 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 STEAP2Q8NFT2 490 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 SFXN5Q8TD22 340 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 ISG20Q96AZ6 181 aaKnown RBP12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 WDFY2Q96P53 400 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
PCDHGB3-201ENST00000576222 MEGF11A6BM72 1044 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDHR4A6H8M9 788 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF208O43345 1280 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 TRA2BP62995 288 aaKnown RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 GALK2Q01415 458 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CRHR2Q13324 411 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDS1Q92903 461 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ISYNA1Q9NPH2 558 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 FANCFQ9NPI8 374 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 NRIP3Q9NQ35 241 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRMT8Q9NR22 394 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 FBXL12Q9NXK8 326 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 RBMXL2O75526 392 aaKnown RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CLEC3AO75596 197 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 KLKB1P03952 638 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 TPOP07202 933 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 FUT1P19526 365 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 HOXA9P31269 272 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CXADRP78310 365 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 SIRPAP78324 504 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 IL13RA1P78552 427 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARHGAP40Q5TG30 622 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 NPIPA5A0A0B4J1W7 369 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 NPIPA7E9PJI5 369 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PHYHO14832 338 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 FADS1O60427 444 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CSTBP04080 98 aaKnown RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 NPIPA8P0DM63 369 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRICKLE2Q7Z3G6 844 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF619Q8N2I2 560 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 HAVCR2Q8TDQ0 301 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 HERVK_113Q902F9 699 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PMM1Q92871 262 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 LRRC46Q96FV0 321 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 MACROD1Q9BQ69 325 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 NARFLQ9H6Q4 476 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 MVB12BQ9H7P6 319 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PGAP2Q9UHJ9 254 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 DCDC2BA2VCK2 349 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 UNCXA6NJT0 531 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 DNAJB6O75190 326 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PDE7AQ13946 482 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 TMUB2Q71RG4 321 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 RAB11FIP2Q7L804 512 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 OLIG3Q7RTU3 272 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDRT4Q8N9R6 151 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 DNAAF1Q8NEP3 725 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 DNAJA3Q96EY1 480 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 PBDC1Q9BVG4 233 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 BTBD2Q9BX70 525 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC38A1Q9H2H9 487 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 MYEF2Q9P2K5 600 aaKnown RBP12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF281Q9Y2X9 895 aa12.26□□□□□ -0.45
PCDHGB3-201ENST00000576222 H7C417 338 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 WDPCPO95876 746 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 AMY2BP19961 511 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC6A9P48067 706 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CAPZA1P52907 286 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 DGCR2P98153 550 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 YIF1BQ5BJH7 314 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 TCTN3Q6NUS6 607 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZER1Q7Z7L7 766 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR13C2Q8NGS9 318 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 C16orf58Q96GQ5 468 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SMCHD1A6NHR9 2005 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SRPX2O60687 465 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 H2BFMP0C1H6 154 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 CAMLGP49069 296 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SEC13P55735 322 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 TAS2R19P59542 299 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 HYAL4Q2M3T9 481 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC6A19Q695T7 634 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 C17orf107Q6ZR85 190 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 MBOAT2Q6ZWT7 520 aa12.25□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR13C3Q8NGS6 347 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms