RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ACER3Q9NUN7 267 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 PAQR5Q9NXK6 330 aaPredicted RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.82
CHD3-216ENST00000573936 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.82
CHD3-216ENST00000573936 CDHR4A6H8M9 788 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 CFAP73A6NFT4 308 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 CLDN24A6NM45 220 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 PRSS44E7EML9 344 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 H3BML4 177 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ETV2O00321 342 aaPredicted RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 ZG16O60844 167 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 UBOX5O94941 541 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 PRKCAP17252 672 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 FKBP2P26885 142 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 PCGF2P35227 344 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 APOBEC1P41238 236 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 HTR3AP46098 478 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 NUDT2P50583 147 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 GZMMP51124 257 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 MNAT1P51948 309 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 CLDN18P56856 261 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 EEF1A1P68104 462 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 PMPCAQ10713 525 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 EPS8Q12929 822 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 FOXF1Q12946 379 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 VEZF1Q14119 521 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 VMACQ2NL98 169 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ACSF3Q4G176 576 aaPredicted RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 RABL3Q5HYI8 236 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 DCST1Q5T197 706 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 RIPPLY2Q5TAB7 128 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 NSUN5P2Q63ZY6 315 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 DHRS4L2Q6PKH6 230 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 C3P1Q6ZMU1 363 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ZNF836Q6ZNA1 936 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 HMGN2P46Q86SG4 172 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 PATL1Q86TB9 770 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 CALHM3Q86XJ0 350 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 LACC1Q8IV20 430 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ZZZ3Q8IYH5 903 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 C10orf111Q8N326 155 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ZNF808Q8N4W9 903 aaPredicted RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 OR5M1Q8NGP8 315 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 FBXO27Q8NI29 283 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 POC1BQ8TC44 478 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 RASSF5Q8WWW0 418 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 ASB5Q8WWX0 329 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 CNOT9Q92600 299 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 REXO5Q96IC2 774 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 UCN2Q96RP3 112 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 TRIB1Q96RU8 372 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 GPATCH1Q9BRR8 931 aaKnown RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 TTYH2Q9BSA4 534 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 TRIM8Q9BZR9 551 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 KLHL28Q9NXS3 571 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 TAGLN3Q9UI15 199 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 SLC13A4Q9UKG4 626 aa9.95□□□□□ -0.82
CHD3-216ENST00000573936 SPIN1Q9Y657 262 aaPredicted RBP9.95□□□□□ -0.82
CHD3-216ENST00000573936 NCKAP5O14513 1909 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 CD8B2A6NJW9 211 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 HSPB2A8KAH6 182 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 FAM220BPB1ANY3 271 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 SHISA8B8ZZ34 492 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 NTN1O95631 604 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 IFNA14P01570 189 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 IL2RAP01589 272 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 T-ENOLP0DO92 83 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 GLI4P10075 376 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 PSMA4P25789 261 aaKnown RBP9.94□□□□□ -0.82
CHD3-216ENST00000573936 RYKP34925 604 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 TIMP3P35625 211 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 CPA2P48052 419 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 IDH2P48735 452 aaKnown RBP9.94□□□□□ -0.82
CHD3-216ENST00000573936 DLX5P56178 289 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 PCBP3P57721 371 aaKnown RBP9.94□□□□□ -0.82
CHD3-216ENST00000573936 NUP107P57740 925 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 SESN3P58005 492 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 COPZ1P61923 177 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 SELENBP1Q13228 472 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 TOMM34Q15785 309 aaPredicted RBP9.94□□□□□ -0.82
CHD3-216ENST00000573936 HSPB2Q16082 182 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 RTL6Q6ICC9 239 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 ESPNLQ6ZVH7 1005 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 PLEKHM3Q6ZWE6 761 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 CCDC80Q76M96 950 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 GRINAQ7Z429 371 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 MRGPRGQ86SM5 289 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 ARMC8Q8IUR7 673 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 LILRA2Q8N149 483 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 CLIP4Q8N3C7 705 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 OR10Q1Q8NGQ4 319 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 SLC26A7Q8TE54 656 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 SMPDL3BQ92485 455 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 ZNF583Q96ND8 569 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 TUBA1CQ9BQE3 449 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 PINK1Q9BXM7 581 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 PIF1Q9H611 641 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 TIGARQ9NQ88 270 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 NDE1Q9NXR1 346 aa9.94□□□□□ -0.82
CHD3-216ENST00000573936 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms