RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PEX5LQ8IYB4 626 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 C10orf111Q8N326 155 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 OR2V1Q8NHB1 315 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 WDR60Q8WVS4 1066 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM234Q8WY98 164 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 RNASE6Q93091 150 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM19Q96HH6 336 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 KLHL15Q96M94 604 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 IKZF5Q9H5V7 419 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM185BQ9H7F4 350 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 BCL2L10Q9HD36 194 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 ACER3Q9NUN7 267 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 MRGBPQ9NV56 204 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 DNAJB12Q9NXW2 375 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 LEF1Q9UJU2 399 aaPredicted RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 NDUFAF1Q9Y375 327 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 ANKHD1Q8IWZ3 2542 aaKnown RBP9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CDHR4A6H8M9 788 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 FAAHO00519 579 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 TNFSF11O14788 317 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CXCL13O43927 109 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 AQP8O94778 261 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 ARAFP10398 606 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 FCGR2AP12318 317 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 KIR2DL2P43627 348 aaPredicted RBP9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 SLC6A8P48029 635 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CARD18P57730 90 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 SELENBP1Q13228 472 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 RUNDC3AQ59EK9 446 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 MRPL2Q5T653 305 aaKnown RBP9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 HBMQ6B0K9 141 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 PLEKHM3Q6ZWE6 761 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 VRK2Q86Y07 508 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 OR52P1PQ8NH57 321 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 OSTF1Q92882 214 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 MAL2Q969L2 176 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 STARD4Q96DR4 205 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 C14orf79Q96F83 325 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CPPED1Q9BRF8 314 aaPredicted RBP9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CCDC106Q9BWC9 280 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 PIGMQ9H3S5 423 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 SAR1AQ9NR31 198 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 RLIMQ9NVW2 624 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 KLHL14Q9P2G3 628 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 FOXD3Q9UJU5 478 aaPredicted RBP9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 PRDM4Q9UKN5 801 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CHST2Q9Y4C5 530 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 CSMD1Q96PZ7 3565 aa9.93□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM247A6NEH6 219 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 GJE1A6NN92 205 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 A8MXE2 369 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 AP3D1O14617 1153 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ANGPT2O15123 496 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 PGM3O95394 542 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 CGAP01215 116 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 THBS1P07996 1170 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ETS2P15036 469 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 RYKP34925 604 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 SFTPDP35247 375 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 APOBEC1P41238 236 aaKnown RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 SF3A3Q12874 501 aaKnown RBP eCLIP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 KLF10Q13118 480 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ADRM1Q16186 407 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ZSWIM7Q19AV6 140 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM176BQ3YBM2 270 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 LIN52Q52LA3 116 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 RPS26P11Q5JNZ5 115 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 PDSS1Q5T2R2 415 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 GCNT6Q5T4J0 391 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 RNF220Q5VTB9 566 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 C3orf33Q6P1S2 294 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF836Q6ZNA1 936 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 GRINAQ7Z429 371 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 GDF7Q7Z4P5 450 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 DHDDSQ86SQ9 333 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 LRRC46Q96FV0 321 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ANKRD27Q96NW4 1050 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 CGREF1Q99674 301 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 RSPO3Q9BXY4 272 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM38AQ9H6F2 299 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 COQ10BQ9H8M1 238 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 PACSIN3Q9UKS6 424 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 CORO2BQ9UQ03 480 aa9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF443Q9Y2A4 671 aaPredicted RBP9.92□□□□□ -0.82
SHCBP1-207ENST00000569702 CSMD2Q7Z408 3487 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 CFAP73A6NFT4 308 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 EVPLLA8MZ36 301 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 EEF1E1-BLOC1S5C9J1V9 151 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 FBP2O00757 339 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 MSTNO14793 375 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 EEF1E1O43324 174 aaKnown RBP9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 SYNGR4O95473 234 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 CD8BP10966 210 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 ADSLP30566 484 aaPredicted RBP9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 UQCRC1P31930 480 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 PEX19P40855 299 aa9.91□□□□□ -0.82
SHCBP1-207ENST00000569702 ACAA2P42765 397 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms