RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 COQ7Q99807 217 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CENPOQ9BU64 300 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SLC19A3Q9BZV2 496 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 OR10A5Q9H207 317 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 Q9N2J8 555 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CTPS2Q9NRF8 586 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 INPP5EQ9NRR6 644 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 ASB6Q9NWX5 421 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 DNAJB12Q9NXW2 375 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HAO2Q9NYQ3 351 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 TAS2R16Q9NYV7 291 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FLRT3Q9NZU0 649 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CNIH4Q9P003 139 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 H2AFY2Q9P0M6 372 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 HCN3Q9P1Z3 774 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 LRIT1Q9P2V4 623 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CBLCQ9ULV8 474 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 STUB1Q9UNE7 303 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 CFL2Q9Y281 166 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SLC35A3Q9Y2D2 325 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SF3B6Q9Y3B4 125 aaKnown RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 SIT1Q9Y3P8 196 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 PEX16Q9Y5Y5 336 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 RNF215Q9Y6U7 377 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 MN1Q10571 1320 aaPredicted RBP4.96□□□□□ -1.62
SF3B3-213ENST00000569687 FANCMQ8IYD8 2048 aa4.96□□□□□ -1.62
SF3B3-213ENST00000569687 GOLGA4Q13439 2230 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MUC3AQ02505 3323 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 A0A087WUJ7 227 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PNMA8CA0A1B0GUJ8 204 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TRDV1A0A1B0GX56 115 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 FAM86C2PA6NEL3 165 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF670-ZNF695F2Z2N8 137 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 J3QRK9 145 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 J3QW42 95 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 HRKO00198 91 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MYL12BO14950 172 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TO15178 435 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TPD52L2O43399 206 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 IDH3BO43837 385 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PIP5K1CO60331 668 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 HCN1O60741 890 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PPM1BO75688 479 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 OR2B3O76000 313 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 NTN1O95631 604 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 IL1AP01583 271 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 IGKV3-11P04433 115 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 NGFRP08138 427 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PEPDP12955 493 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 IFI30P13284 250 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 BMP7P18075 431 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 BCKDHBP21953 392 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 NME2P22392 152 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SSTR4P31391 388 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 RORAP35398 523 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SOX6P35712 828 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 RPS19P39019 145 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 GPR4P46093 362 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CAPZA2P47755 286 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SLC9A3P48764 834 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CSNK1EP49674 416 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 RORCP51449 518 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 GPR143P51810 404 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CDH11P55287 796 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 GFERP55789 205 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 WNT4P56705 351 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 OR1D5P58170 312 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PSPHP78330 225 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MAT1AQ00266 395 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 IFITM3Q01628 133 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 BDH1Q02338 343 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TNP2Q05952 138 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SIGLEC14Q08ET2 396 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SPEM2Q0P670 501 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF155Q12901 538 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ERV3-1Q14264 604 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SHBQ15464 509 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF181Q2M3W8 571 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 RGS21Q2M5E4 152 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 DEFB133Q30KQ1 61 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SOWAHCQ53LP3 525 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PDZK1Q5T2W1 519 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 FNDC7Q5VTL7 733 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 NKAIN2Q5VXU1 208 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SLC30A6Q6NXT4 461 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MRPL14Q6P1L8 145 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SMARCD3Q6STE5 483 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PAQR6Q6TCH4 344 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 KANSL1Q7Z3B3 1105 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 BMP8AQ7Z5Y6 402 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MEX3DQ86XN8 651 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CPOQ8IVL8 374 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM151BQ8IW70 566 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CENPSQ8N2Z9 138 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 PLPP5Q8NEB5 264 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 OR4C3Q8NH37 302 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 C16orf52Q8NHV5 167 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ADIPOR1Q96A54 375 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MMABQ96EY8 250 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms