RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HTR3AP46098 478 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 EPS8Q12929 822 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 QPRTQ15274 297 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.54□□□□□ -0.08
USB1-215ENST00000569252 GLIPR1L2Q4G1C9 344 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 C1orf146Q5VVC0 180 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 WBP2NLQ6ICG8 309 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 ARSKQ6UWY0 536 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 CYP4Z1Q86W10 505 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 C10orf67Q8IYJ2 551 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 CADM2Q8N3J6 435 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 FAM71CQ8NEG0 241 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 FAM83FQ8NEG4 500 aaPredicted RBP14.54□□□□□ -0.08
USB1-215ENST00000569252 RNF217Q8TC41 542 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 GEMIN6Q8WXD5 167 aaKnown RBP14.54□□□□□ -0.08
USB1-215ENST00000569252 ST8SIA1Q92185 356 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 NR4A3Q92570 626 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 PYURFQ96I23 114 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 SFXN2Q96NB2 322 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 UBQLN3Q9H347 655 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 MED17Q9NVC6 651 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 POMPQ9Y244 141 aa14.54□□□□□ -0.08
USB1-215ENST00000569252 EXPH5Q8NEV8 1989 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ERICH4A6NGS2 130 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 C17orf51A8MQB3 221 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 OIP5O43482 229 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 SUSD5O60279 629 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 HCN1O60741 890 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 PRKD3O94806 890 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 IFNW1P05000 195 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ITGA2P17301 1181 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ADH6P28332 368 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 SLC1A3P43003 542 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 MS4A2Q01362 244 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 RBPJQ06330 500 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 RNFT1Q5M7Z0 435 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 WIPI1Q5MNZ9 446 aaPredicted RBP14.53□□□□□ -0.08
USB1-215ENST00000569252 LCN8Q6JVE9 175 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 SPATA24Q86W54 205 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 CARM1Q86X55 608 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 GHDCQ8N2G8 530 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 OR10Q1Q8NGQ4 319 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 HSH2DQ96JZ2 352 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 MRGPRX4Q96LA9 322 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 GPR137Q96N19 417 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 MCHR1Q99705 422 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ARHGDIGQ99819 225 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 OR2B2Q9GZK3 357 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 TSPAN10Q9H1Z9 355 aaPredicted RBP14.53□□□□□ -0.08
USB1-215ENST00000569252 ZDHHC11Q9H8X9 412 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ACER3Q9NUN7 267 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 ASF1BQ9NVP2 202 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 TESQ9UGI8 421 aaKnown RBP14.53□□□□□ -0.08
USB1-215ENST00000569252 SLC7A8Q9UHI5 535 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 SPIN1Q9Y657 262 aaPredicted RBP14.53□□□□□ -0.08
USB1-215ENST00000569252 CNTRLQ7Z7A1 2325 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 NINQ8N4C6 2090 aa14.53□□□□□ -0.08
USB1-215ENST00000569252 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 AQP12BA6NM10 295 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 M0R3H8 397 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 FAAHO00519 579 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 ADAM10O14672 748 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 FRS3O43559 492 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 ZIC3O60481 467 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 UMPSP11172 480 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 HOXB6P17509 224 aaKnown RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 CXCR1P25024 350 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 FKBP2P26885 142 aaKnown RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 APOBEC1P41238 236 aaKnown RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 OR1E2P47887 323 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 SESN3P58005 492 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 CHRNB3Q05901 458 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 MERTKQ12866 999 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 FAM98BQ52LJ0 330 aaKnown RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 ARHGAP11AQ6P4F7 1023 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 ENPP6Q6UWR7 440 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 MAMDC2Q7Z304 686 aaPredicted RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 VTCN1Q7Z7D3 282 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 AQP12AQ8IXF9 295 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 GPR32P1Q8NGA4 272 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 DNAJA4Q8WW22 397 aaPredicted RBP14.52□□□□□ -0.09
USB1-215ENST00000569252 CHST2Q9Y4C5 530 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 V9GYQ6 96 aa14.52□□□□□ -0.09
USB1-215ENST00000569252 DIDO1Q9BTC0 2240 aaKnown RBP14.51□□□□□ -0.09
USB1-215ENST00000569252 GJE1A6NN92 205 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 FMO6PO60774 539 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 BCAS1O75363 584 aaPredicted RBP14.51□□□□□ -0.09
USB1-215ENST00000569252 ACTL6AO96019 429 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 LDLRP01130 860 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 EDN3P14138 238 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 ZNF17P17021 662 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 CHMP24386 653 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 PSMA4P25789 261 aaKnown RBP14.51□□□□□ -0.09
USB1-215ENST00000569252 ACAA2P42765 397 aaKnown RBP14.51□□□□□ -0.09
USB1-215ENST00000569252 POLR2HP52434 150 aaKnown RBP14.51□□□□□ -0.09
USB1-215ENST00000569252 CRYBA2P53672 197 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 TAS2R41P59536 307 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 HOXC5Q00444 222 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 OR1Q1Q15612 314 aa14.51□□□□□ -0.09
USB1-215ENST00000569252 NRF1Q16656 503 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms