RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	PSMA8	Q8TAA3	256 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TMEM234	Q8WY98	164 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ST8SIA1	Q92185	356 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF75CP	Q92670	426 aa	Predicted RBP	13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TRMO	Q9BU70	441 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ATAD3A	Q9NVI7	634 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OXSM	Q9NWU1	459 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ATP6V1H	Q9UI12	483 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	EMCN	Q9ULC0	261 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676		A0A1W2PNR3	127 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CIB4	A0PJX0	185 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676		E7EQL1	145 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NPIPB9	F8W1W9	429 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	GPR171	O14626	319 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	AZIN1	O14977	448 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	RIPK2	O43353	540 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DNAJA2	O60884	412 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PROC	P04070	461 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CD40	P25942	277 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FKBP2	P26885	142 aa	Known RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MAPK1	P28482	360 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CCT3	P49368	545 aa	Known RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	GZMK	P49863	264 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FABP6	P51161	128 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	EFNA4	P52798	201 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	RPL38	P63173	70 aa	Known RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	QPRT	Q15274	297 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	KRTAP24-1	Q3LI83	254 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LSM12	Q3MHD2	195 aa	Known RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CLEC6A	Q6EIG7	209 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	BHLHB9	Q6PI77	547 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TMPPE	Q6ZT21	453 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TMCO5A	Q8N6Q1	288 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MZB1	Q8WU39	189 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OIT3	Q8WWZ8	545 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OR5P2	Q8WZ92	322 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	APH1A	Q96BI3	265 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZHX1-C8orf76	Q96EF9	292 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OTUB1	Q96FW1	271 aa	Predicted RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OR5B2	Q96R09	309 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF300	Q96RE9	604 aa	Predicted RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	INPP5K	Q9BT40	448 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NMUR2	Q9GZQ4	415 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ASB6	Q9NWX5	421 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TAS2R16	Q9NYV7	291 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MID2	Q9UJV3	735 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SLC25A15	Q9Y619	301 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SPIN1	Q9Y657	262 aa	Predicted RBP	13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PMF1-BGLAP	U3KQ54	211 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CAD	P27708	2225 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FREM1	Q5H8C1	2179 aa		13.88	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NDUFS8	O00217	210 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LSM1	O15116	133 aa	Known RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SCAMP2	O15127	329 aa	Known RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OIP5	O43482	229 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DNPH1	O43598	174 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LMX1B	O60663	402 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	URI1	O94763	535 aa	Predicted RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	AK1	P00568	194 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	USF1	P22415	310 aa	Predicted RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DIO1	P49895	249 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TP53BP2	Q13625	1128 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TIGD2	Q4W5G0	525 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LIPM	Q5VYY2	423 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ABLIM2	Q6H8Q1	611 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MTDH	Q86UE4	582 aa	Known RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	UBE2J2	Q8N2K1	259 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF525	Q8N782	197 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF614	Q8N883	585 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SFXN5	Q8TD22	340 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	C10orf105	Q8TEF2	133 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LAT2	Q9GZY6	243 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FKRP	Q9H9S5	495 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TNFRSF12A	Q9NP84	129 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MALT1	Q9UDY8	824 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	BAIAP2L1	Q9UHR4	511 aa		13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NOSIP	Q9Y314	301 aa	Known RBP	13.87	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DUXA	A6NLW8	204 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CCT8L1P	A6NM43	557 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ESPN	B1AK53	854 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SULT2B1	O00204	365 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PLIN3	O60664	434 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LYPLA1	O75608	230 aa	Predicted RBP	13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	RAD51D	O75771	328 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	IGHV4-31	P0DP07	118 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	BCKDHA	P12694	445 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CPA3	P15088	417 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SRD5A1	P18405	259 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PGC	P20142	388 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	HNF1A	P20823	631 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CRHR1	P34998	444 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CCR4	P51679	360 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LSM11	P83369	360 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SPDYE7P	Q495Y7	208 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SYT14P1	Q58G82	188 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FAM166A	Q6J272	317 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	C17orf78	Q8N4C9	275 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms