RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NPIPA5A0A0B4J1W7 369 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 LOC390937A0A1W2PQ73 354 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 A0A1W2PR80 420 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 NPIPA7E9PJI5 369 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 H3BQF6 201 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ETV2O00321 342 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 TBX19O60806 448 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CRCPO75575 148 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 H6PDO95479 791 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 SNRPAP09012 282 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 NPIPA8P0DM63 369 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ITGA2P17301 1181 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CFPP27918 469 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 DIO1P49895 249 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 RNF144AP50876 292 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CCR4P51679 360 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CSNK2A1P68400 391 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 PHC1P78364 1004 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 SLC7A5Q01650 507 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CBFBQ13951 182 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 LASP1Q14847 261 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 PDK3Q15120 406 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 QPRTQ15274 297 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 NDUFAF6Q330K2 333 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 IQCCQ4KMZ1 466 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF385BQ569K4 471 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ABLIM2Q6H8Q1 611 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 TMCO5AQ8N6Q1 288 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF614Q8N883 585 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF540Q8NDQ6 660 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 TOR1AIP2Q8NFQ8 470 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 OR5W2Q8NH69 310 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CDS1Q92903 461 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 MUS81Q96NY9 551 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 FOXN4Q96NZ1 517 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 SORCS2Q96PQ0 1159 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 ADAM19Q9H013 955 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 C12orf65Q9H3J6 166 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 CDC42EP4Q9H3Q1 356 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 PIGUQ9H490 435 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 GSTO2Q9H4Y5 243 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 REEP4Q9H6H4 257 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 SH3BP4Q9P0V3 963 aa10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
GTF3C1-209ENST00000568569 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 SEC22BO75396 215 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 HMGN2P05204 90 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 UBL4AP11441 157 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF23P17027 643 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 PRPH2P23942 346 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 SRP14P37108 136 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 SNRPD2P62316 118 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 KIAA0040Q15053 153 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 GABRA6Q16445 453 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 CARTPTQ16568 116 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 SWI5Q1ZZU3 235 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 TIGD2Q4W5G0 525 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 CDC73Q6P1J9 531 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 TMPPEQ6ZT21 453 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 MTDHQ86UE4 582 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 C17orf78Q8N4C9 275 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 RFWD2Q8NHY2 731 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 FBXO17Q96EF6 278 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 FAM120BQ96EK7 910 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 CCT7Q99832 543 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 C1QTNF6Q9BXI9 259 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 BPESC1Q9GZL8 116 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 ANKZF1Q9H8Y5 726 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 SERINC1Q9NRX5 453 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 ZCCHC3Q9NUD5 404 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 DTNAQ9Y4J8 743 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 MEGF8Q7Z7M0 2845 aa10.34□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 NPIPB9F8W1W9 429 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 SULT2B1O00204 365 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 GPR171O14626 319 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ZNF264O43296 627 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 AKAP10O43572 662 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 EIF4E2O60573 245 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 GSTA1P08263 222 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ITGA5P08648 1049 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ATP12AP54707 1039 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 NAA20P61599 178 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 PDE7AQ13946 482 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 MLC1Q15049 377 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 MST1LQ2TV78 715 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 SYT14P1Q58G82 188 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 DCST2Q5T1A1 773 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 C1QTNF12Q5T7M4 302 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 TIFABQ6ZNK6 161 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 CCNYL1Q8N7R7 359 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 C1orf162Q8NEQ5 155 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC25A43Q8WUT9 341 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ST8SIA1Q92185 356 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ZMYND19Q96E35 227 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 CCDC126Q96EE4 140 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 ZHX1-C8orf76Q96EF9 292 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms