RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 IGHV3-9P01782 118 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 THBS1P07996 1170 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 UBL4AP11441 157 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 IGHV1-2P23083 117 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 RAC3P60763 192 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 SPOCK1Q08629 439 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
NME3-211ENST00000568561 ZCCHC23Q6ZST2 131 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 SLC43A2Q8N370 569 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 TOR1AIP2Q8NFQ8 470 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 OR5P2Q8WZ92 322 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 C3orf30Q96M34 536 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 TRMOQ9BU70 441 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 SERHL2Q9H4I8 314 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 KCNE5Q9UJ90 142 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
NME3-211ENST00000568561 IGHV4-30-2A0A087WSY4 118 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 CFLARO15519 480 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
NME3-211ENST00000568561 CYTIPO60759 359 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 RAD51DO75771 328 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 SLU7O95391 586 aaKnown RBP13.71□□□□□ -0.21
NME3-211ENST00000568561 FESP07332 822 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 ALDH3A1P30838 453 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 ARRB2P32121 409 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 SKP2Q13309 424 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 CBFBQ13951 182 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 GPR68Q15743 365 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 XKR7Q5GH72 579 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 SLC25A53Q5H9E4 307 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 PHC2Q8IXK0 858 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 PSMA8Q8TAA3 256 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
NME3-211ENST00000568561 THUMPD3Q9BV44 507 aaKnown RBP13.71□□□□□ -0.21
NME3-211ENST00000568561 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.21
NME3-211ENST00000568561 MID2Q9UJV3 735 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 B3GALT5Q9Y2C3 310 aa13.71□□□□□ -0.21
NME3-211ENST00000568561 A0A1W2PR80 420 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 SERINC4A6NH21 518 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 TLX2O43763 284 aaPredicted RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 EIF4E2O60573 245 aaKnown RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 FCMRO60667 390 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 KRT16P08779 473 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 DDX5P17844 614 aaKnown RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 GGT1P19440 569 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 COX5AP20674 150 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 MAPK1P28482 360 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 RPL3P39023 403 aaKnown RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 CASP9P55211 416 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 MERTKQ12866 999 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 DTX2Q86UW9 622 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
NME3-211ENST00000568561 SFXN5Q8TD22 340 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 MUCL1Q96DR8 90 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 APOPT1Q96IL0 206 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 SDF2Q99470 211 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 CACNG6Q9BXT2 260 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 L2HGDHQ9H9P8 463 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 SLC17A7Q9P2U7 560 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 NBEAL1Q6ZS30 2694 aa13.7□□□□□ -0.22
NME3-211ENST00000568561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.69□□□□□ -0.229e-14■■■■□ 24.2
NME3-211ENST00000568561 OR5H1A6NKK0 313 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 ETV2O00321 342 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 NPHS1O60500 1241 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 BCAS1O75363 584 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 FGF4P08620 206 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 DIO1P49895 249 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 ZNF83P51522 516 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 NUDT6P53370 316 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 SESN3P58005 492 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 HBA1P69905 142 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 IRX1P78414 480 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 CHRNEQ04844 493 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 LSM12Q3MHD2 195 aaKnown RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 ATP6AP1LQ52LC2 224 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 TIMM23BQ5SRD1 257 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 ABLIM2Q6H8Q1 611 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 DNAJC14Q6Y2X3 702 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 GALNT5Q7Z7M9 940 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 HMGN2P46Q86SG4 172 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 CLECL1Q8IZS7 167 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 CNPY4Q8N129 248 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 UBE2J2Q8N2K1 259 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 ZNF433Q8N7K0 673 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 OR52N5Q8NH56 324 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 DUSP26Q9BV47 211 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
NME3-211ENST00000568561 ATAD3AQ9NVI7 634 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 FAIMQ9NVQ4 179 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms