RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	ACAA2	P42765	397 aa	Known RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POLR2H	P52434	150 aa	Known RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MAP2K6	P52564	334 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CRYBA2	P53672	197 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CASP6	P55212	293 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TLE1	Q04724	770 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZSCAN26	Q16670	478 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC25A53	Q5H9E4	307 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NHSL2	Q5HYW2	709 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	WLS	Q5T9L3	541 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	LCN8	Q6JVE9	175 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CYP4Z1	Q86W10	505 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PM20D2	Q8IYS1	436 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PYURF	Q96I23	114 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	HSH2D	Q96JZ2	352 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MCHR1	Q99705	422 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	UGT2B28	Q9BY64	529 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POLR2J2	Q9GZM3	115 aa	Known RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POLR2J3	Q9H1A7	115 aa	Known RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC6A5	Q9Y345	797 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FAM32A	Q9Y421	112 aa	Known RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499		B4DXG7	233 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ETV2	O00321	342 aa	Predicted RBP	13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRRG2	O14669	202 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PNMT	P11086	282 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRG2	P13727	222 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ITGA2	P17301	1181 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	HOXB6	P17509	224 aa	Known RBP	13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CXCR1	P25024	350 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GFRA1	P56159	465 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PLAUR	Q03405	335 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FOXF1	Q12946	379 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SELENBP1	Q13228	472 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FLOT2	Q14254	428 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TOMM34	Q15785	309 aa	Predicted RBP	13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	BCL2A1	Q16548	175 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TMEM44	Q2T9K0	475 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PDSS1	Q5T2R2	415 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	VASN	Q6EMK4	673 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CYP2R1	Q6VVX0	501 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PLEKHM3	Q6ZWE6	761 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ASRGL1	Q7L266	308 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CHMP1B	Q7LBR1	199 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MEIOB	Q8N635	442 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	LSMEM1	Q8N8F7	131 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GALNT11	Q8NCW6	608 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR6T1	Q8NGN1	323 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	RNF217	Q8TC41	542 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	LIPG	Q9Y5X9	500 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	EML6	Q6ZMW3	1958 aa		13.48	□□□□□ -0.25
KLHDC4-223	ENST00000568499	AQP12B	A6NM10	295 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NPIPA2	E9PIF3	369 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NPIPA3	F8WFD2	350 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499		H3BML4	177 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	C1QL1	O75973	258 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRKD3	O94806	890 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	EPPIN	O95925	133 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	BMP7	P18075	431 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TACR3	P29371	465 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR1E2	P47887	323 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF136	P52737	540 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	DLX5	P56178	289 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	B3GALT5-AS1	P59052	145 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TAS2R41	P59536	307 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	RAC1	P63000	192 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	HOXC5	Q00444	222 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MS4A2	Q01362	244 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR1Q1	Q15612	314 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	C3orf33	Q6P1S2	294 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF613	Q6PF04	617 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ULK3	Q6PHR2	472 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POMZP3	Q6PJE2	187 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	DEF8	Q6ZN54	512 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	VTCN1	Q7Z7D3	282 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF605	Q86T29	641 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	AQP12A	Q8IXF9	295 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR5M1	Q8NGP8	315 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR10Q1	Q8NGQ4	319 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MIB2	Q96AX9	1013 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC47A1	Q96FL8	570 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	C12orf10	Q9HB07	376 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC7A8	Q9UHI5	535 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CAMK2A	Q9UQM7	478 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POMP	Q9Y244	141 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF337	Q9Y3M9	751 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	COL6A6	A6NMZ7	2263 aa		13.47	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SHISA8	B8ZZ34	492 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ACOT8	O14734	319 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ADAM11	O75078	769 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NTN1	O95631	604 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TPO	P07202	933 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	UMPS	P11172	480 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC7A1	P30825	629 aa		13.46	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CLK1	P49759	484 aa	Known RBP	13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms