RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 RAB3BP20337 219 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 ADH7P40394 386 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 PPP1CAP62136 330 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 RGS1Q08116 209 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 C1orf61Q13536 156 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 RPE65Q16518 533 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 MEPCEQ7L2J0 689 aaKnown RBP8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 KANSL1Q7Z3B3 1105 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 FAM109AQ8N4B1 249 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 TMEM52Q8NDY8 209 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 BADQ92934 168 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 DHRS1Q96LJ7 313 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 MICU1Q9BPX6 476 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 CCDC3Q9BQI4 270 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 RPP25Q9BUL9 199 aaKnown RBP8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 OR51J1Q9H342 316 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 DPAGT1Q9H3H5 408 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 EPHX3Q9H6B9 360 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 METTL17Q9H7H0 456 aaPredicted RBP8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 CLDND1Q9NY35 253 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 LIPT1Q9Y234 373 aa8.31□□□□□ -1.08
HDGFL3-206ENST00000568294 SEC16AO15027 2179 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TRBV2A0A0J9YWF9 115 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CASC3O15234 703 aaKnown RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CHP2O43745 196 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FGF17O60258 216 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 SIX6O95475 246 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 C1QBP02746 253 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 HMGN1P05114 100 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ATF1P18846 271 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 DNASE1P24855 282 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FPR3P25089 353 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 STAT5AP42229 794 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PPP2CBP62714 309 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PPP2CAP67775 309 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 RUNX2Q13950 521 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ANKRD33Q7Z3H0 272 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ASPGQ86U10 573 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CCDC28AQ8IWP9 274 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ZNF687Q8N1G0 1237 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ARIH2OSQ8N7S6 290 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 SPPL3Q8TCT6 385 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 WFIKKN2Q8TEU8 576 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 DNAJA4Q8WW22 397 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 MENTQ9BUN1 341 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TMEM168Q9H0V1 697 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 HCN3Q9P1Z3 774 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ZNF69Q9UC07 566 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ING1Q9UK53 422 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 IER3IP1Q9Y5U9 82 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 IRGMA1A4Y4 181 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CTSVO60911 334 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 WNT1P04628 370 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ANKRD34CP0C6C1 535 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ENPP1P22413 925 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 DDX6P26196 483 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 GDI1P31150 447 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 VEGFCP49767 419 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 STX4Q12846 297 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 SQSTM1Q13501 440 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 DCST2Q5T1A1 773 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 AGBL4Q5VU57 503 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PRSS58Q8IYP2 241 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FTMTQ8N4E7 242 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 POGLUT1Q8NBL1 392 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 HSD17B8Q92506 261 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PTP4A1Q93096 173 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 NMNAT3Q96T66 252 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TEAD3Q99594 435 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 MARK1Q9P0L2 795 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 IKZF2Q9UKS7 526 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 MED31Q9Y3C7 131 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CACNB4O00305 520 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FMO6PO60774 539 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 RGS11O94810 467 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TCRBP04435 133 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 RLN1P04808 185 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 CT62P0C5K7 136 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 GJA4P35212 333 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FXYD6P3P58550 94 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TSPAN5P62079 268 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ERVK-25P63136 954 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 SNTB2Q13425 540 aaKnown RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 PXDC1Q5TGL8 231 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 HBMQ6B0K9 141 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 FAM109BQ6ICB4 259 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 VN1R4Q7Z5H5 301 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ZNF511Q8NB15 262 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 TMIEQ8NEW7 156 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
HDGFL3-206ENST00000568294 ZPLD1Q8TCW7 415 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms