RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 OR5D16Q8NGK9 328 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 RFWD2Q8NHY2 731 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 ZNF75CPQ92670 426 aaPredicted RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 MUCL1Q96DR8 90 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 THUMPD3Q9BV44 507 aaKnown RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 POLE3Q9NRF9 147 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 ACER3Q9NUN7 267 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 FN1P02751 2386 aaKnown RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 DPRXA6NFQ7 191 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 INAFM1C9JVW0 142 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 CLOCKO15516 846 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 FCMRO60667 390 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SKAP2O75563 359 aaPredicted RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 UGT2B17O75795 530 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SNUPNO95149 360 aaKnown RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 PGM3O95394 542 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 CSTAP01040 98 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 THBS1P07996 1170 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SOD3P08294 240 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SOAT1P35610 550 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 ETV4P43268 484 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 CCR4P51679 360 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SKP2Q13309 424 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 GPR68Q15743 365 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 PGS1Q32NB8 556 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 ALKBH2Q6NS38 261 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SEZ6L2Q6UXD5 910 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 EIF3MQ7L2H7 374 aaKnown RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 MTDHQ86UE4 582 aaKnown RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 NUDCD3Q8IVD9 361 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 TMCO5AQ8N6Q1 288 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 OR5AK3PQ8NH89 298 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 RADILQ96JH8 1075 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 KCNE5Q9UJ90 142 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 SLC35A3Q9Y2D2 325 aa13.28□□□□□ -0.28
RNF40-209ENST00000566703 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 SPIN1Q9Y657 262 aaPredicted RBP13.28□□□□□ -0.28
RNF40-209ENST00000566703 IGKV3D-15A0A087WSY6 115 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 IGHV3-15A0A0B4J1V0 119 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 PRSS51A0A1B0GVH4 220 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 A0A1W2PP18 115 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 ANKRD28O15084 1053 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 SMAD9O15198 467 aaKnown RBP13.27□□□□□ -0.29
RNF40-209ENST00000566703 DNPH1O43598 174 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 TYROBPO43914 113 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 H6PDO95479 791 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 APOBEC1P41238 236 aaKnown RBP13.27□□□□□ -0.29
RNF40-209ENST00000566703 CLK1P49759 484 aaKnown RBP13.27□□□□□ -0.29
RNF40-209ENST00000566703 DIO1P49895 249 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 RNF144AP50876 292 aaPredicted RBP13.27□□□□□ -0.29
RNF40-209ENST00000566703 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 ANXA8L1Q5VT79 327 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 OR4F3Q6IEY1 312 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 KIRREL3Q8IZU9 778 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 TRIM44Q96DX7 344 aaPredicted RBP13.27□□□□□ -0.29
RNF40-209ENST00000566703 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 REG4Q9BYZ8 158 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 TRIM2Q9C040 744 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 SERHL2Q9H4I8 314 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 EMC3Q9P0I2 261 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 PRSS50Q9UI38 385 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 MKLN1Q9UL63 735 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 LIPT1Q9Y234 373 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 ROS1P08922 2347 aa13.27□□□□□ -0.29
RNF40-209ENST00000566703 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 RNF103-CHMP3A0A140T963 221 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 GOLGA8OA6NCC3 632 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 KIAA1324LA8MWY0 1029 aaPredicted RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 GOLGA8NF8WBI6 632 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 SULT2B1O00204 365 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 SCN2BO60939 215 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 CRLF1O75462 422 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 CYP7B1O75881 506 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 CREB1P16220 341 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 GGT1P19440 569 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 COX5AP20674 150 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 UQCRC2P22695 453 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 IGHV1-2P23083 117 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 PGM1P36871 562 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 RPS26P62854 115 aaKnown RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 BSPH1Q075Z2 132 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 MERTKQ12866 999 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 VEZF1Q14119 521 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 PPA1Q15181 289 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 PGGHGQ32M88 737 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 SYT14P1Q58G82 188 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 USF3Q68DE3 2245 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms