RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 UBTFL6P0CB48 400 aaPredicted RBP16.28■□□□□ 0.2
USB1-213ENST00000566292 ADSLP30566 484 aaPredicted RBP16.28■□□□□ 0.2
USB1-213ENST00000566292 SLC7A1P30825 629 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 NR1H2P55055 460 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 SESN3P58005 492 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 CASP8Q14790 479 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 SPANXN4Q5MJ08 99 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 ANXA8L1Q5VT79 327 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 SAXO2Q658L1 398 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
USB1-213ENST00000566292 C16orf62Q7Z3J2 963 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 CIARTQ8N365 385 aaPredicted RBP16.28■□□□□ 0.2
USB1-213ENST00000566292 SLC43A2Q8N370 569 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 XAGE5Q8WWM1 108 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 PSD2Q9BQI7 771 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 TMEM204Q9BSN7 226 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 CENPHQ9H3R5 247 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 MEAF6Q9HAF1 191 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 EXD2Q9NVH0 621 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 RAB21Q9UL25 225 aa16.28■□□□□ 0.2
USB1-213ENST00000566292 ZANQ9Y493 2812 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 PRAMEF27A3QJZ7 478 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 SNUPNO95149 360 aaKnown RBP16.27■□□□□ 0.2
USB1-213ENST00000566292 LBPP18428 481 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 PGM1P36871 562 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 LTBQ06643 244 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 STX3Q13277 289 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 CEP85LQ5SZL2 805 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 SFRP5Q5T4F7 317 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 PRSS57Q6UWY2 283 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 PLEKHM3Q6ZWE6 761 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 YTHDF3Q7Z739 585 aaKnown RBP16.27■□□□□ 0.2
USB1-213ENST00000566292 FAM71CQ8NEG0 241 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 STEAP2Q8NFT2 490 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 ST8SIA1Q92185 356 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 NEURL3Q96EH8 262 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 TEX37Q96LM6 180 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 Q96MF0 132 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 OR5B2Q96R09 309 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 GSX2Q9BZM3 304 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 BCO1Q9HAY6 547 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 KCNK9Q9NPC2 374 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 ACER3Q9NUN7 267 aa16.27■□□□□ 0.2
USB1-213ENST00000566292 CADP27708 2225 aa16.27■□□□□ 0.19
USB1-213ENST00000566292 TLN2Q9Y4G6 2542 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 FN1P02751 2386 aaKnown RBP16.26■□□□□ 0.19
USB1-213ENST00000566292 E9PBE3 544 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 SMAD9O15198 467 aaKnown RBP16.26■□□□□ 0.19
USB1-213ENST00000566292 AGR2O95994 175 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ADAP00813 363 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 GUSBP08236 651 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
USB1-213ENST00000566292 EDNRAP25101 427 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 PTH2RP49190 550 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 PLAURQ03405 335 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 BST1Q10588 318 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 MERTKQ12866 999 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 DPY19L1Q2PZI1 675 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 AP1ARQ63HQ0 302 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ALKBH2Q6NS38 261 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 CLEC9AQ6UXN8 241 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 FRRS1Q6ZNA5 592 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 EIF3MQ7L2H7 374 aaKnown RBP16.26■□□□□ 0.19
USB1-213ENST00000566292 LRRC34Q8IZ02 419 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 VPS37AQ8NEZ2 397 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 RAB3IL1Q8TBN0 382 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ROPN1LQ96C74 230 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ZG16BQ96DA0 208 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 COX4I2Q96KJ9 171 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
USB1-213ENST00000566292 HDHD5Q9BXW7 423 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 SAP130Q9H0E3 1048 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 POLE3Q9NRF9 147 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 KLHL9Q9P2J3 617 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 WDR45Q9Y484 360 aa16.26■□□□□ 0.19
USB1-213ENST00000566292 C9JVG2 144 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 H7C1Q1 480 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 SDHDO14521 159 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 HS3ST1O14792 307 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 CYTIPO60759 359 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 PGCP20142 388 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 IL32P24001 234 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
USB1-213ENST00000566292 NME5P56597 212 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 UFM1P61960 85 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 RASGEF1BQ0VAM2 473 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 TAB1Q15750 504 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 FAM174BQ3ZCQ3 159 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 ATAD3BQ5T9A4 648 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 OGFOD2Q6N063 350 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 HMGN2P46Q86SG4 172 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 KIRREL3Q8IZU9 778 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 TMEM234Q8WY98 164 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 ZNF75CPQ92670 426 aaPredicted RBP16.25■□□□□ 0.19
USB1-213ENST00000566292 ARL8AQ96BM9 186 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 ZNF775Q96BV0 537 aaPredicted RBP16.25■□□□□ 0.19
USB1-213ENST00000566292 CCDC115Q96NT0 180 aa16.25■□□□□ 0.19
USB1-213ENST00000566292 SLC35A5Q9BS91 424 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms