RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 MST1P26927 711 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 CYB561P49447 251 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 OC90Q02509 493 aaPredicted RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 TOMM34Q15785 309 aaPredicted RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 DHRSXQ8N5I4 330 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 PIGXQ8TBF5 258 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 GPR119Q8TDV5 335 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 CCNL2Q96S94 520 aaPredicted RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 Q9H521 79 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 GPR83Q9NYM4 423 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 CNIH4Q9P003 139 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 MED11Q9P086 117 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 ANKUB1A6NFN9 424 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 F10P00742 488 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 CDH2P19022 906 aaPredicted RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 IFNGR2P38484 337 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 CASRP41180 1078 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 SUMO3P55854 103 aaPredicted RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 MDGA2Q7Z553 956 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 NRMQ8IXM6 262 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 SNIP1Q8TAD8 396 aaKnown RBP27.85■■■□□ 2.05
CTCF-203ENST00000566078 DGCR6LQ9BY27 220 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 ANGPTL4Q9BY76 406 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 DPH1Q9BZG8 443 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 RIBC2Q9H4K1 309 aa27.85■■■□□ 2.05
CTCF-203ENST00000566078 IGLV3-32A0A0A0MS00 114 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 GNB5O14775 395 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 CDC40O60508 579 aaKnown RBP eCLIP27.84■■■□□ 2.05
CTCF-203ENST00000566078 SLC1A3P43003 542 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 SOX8P57073 446 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 QPRTQ15274 297 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 WLSQ5T9L3 541 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 LINC00696Q6ZRV3 163 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 PRICKLE2Q7Z3G6 844 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 ZER1Q7Z7L7 766 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 FAM122AQ96E09 287 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 TAS2R10Q9NYW0 307 aa27.84■■■□□ 2.05
CTCF-203ENST00000566078 GP1BBP13224 206 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 MSX1P28360 303 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 KCNAB2Q13303 367 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 C1orf94Q6P1W5 598 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 MEX3DQ86XN8 651 aaKnown RBP27.83■■■□□ 2.05
CTCF-203ENST00000566078 PFN4Q8NHR9 129 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 TFAP2CQ92754 450 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 FAM46AQ96IP4 442 aaKnown RBP27.83■■■□□ 2.05
CTCF-203ENST00000566078 HS6ST2Q96MM7 605 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 FRMD6Q96NE9 622 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 HHATLQ9HCP6 504 aa27.83■■■□□ 2.05
CTCF-203ENST00000566078 KRCC1Q9NPI7 259 aaPredicted RBP27.83■■■□□ 2.05
CTCF-203ENST00000566078 CEP295Q9C0D2 2601 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 G3V3Y1 287 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 KPNA4O00629 521 aaPredicted RBP27.82■■■□□ 2.04
CTCF-203ENST00000566078 P04436 131 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 CAPGP40121 348 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 RBM34P42696 430 aaKnown RBP27.82■■■□□ 2.04
CTCF-203ENST00000566078 INPP5JQ15735 1006 aaPredicted RBP27.82■■■□□ 2.04
CTCF-203ENST00000566078 AGAP7PQ5VUJ5 663 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 LINC00114Q6XXX2 140 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 ATG4DQ86TL0 474 aaPredicted RBP27.82■■■□□ 2.04
CTCF-203ENST00000566078 AGAP4Q96P64 663 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 UTP23Q9BRU9 249 aaKnown RBP27.82■■■□□ 2.04
CTCF-203ENST00000566078 ZNF426Q9BUY5 554 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 UCK2Q9BZX2 261 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 DSN1Q9H410 356 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 PROK2Q9HC23 129 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 SACM1LQ9NTJ5 587 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 LRFN1Q9P244 771 aa27.82■■■□□ 2.04
CTCF-203ENST00000566078 ELOA3DA6NLF2 546 aaPredicted RBP27.81■■■□□ 2.04
CTCF-203ENST00000566078 OMPP47874 163 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ID4P47928 161 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 TUBA3CQ13748 450 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 DEFB109BQ30KR1 87 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ELOA3BQ3SY89 546 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 SLC36A3Q495N2 470 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 TUBA3EQ6PEY2 450 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 TTC33Q6PID6 262 aaPredicted RBP27.81■■■□□ 2.04
CTCF-203ENST00000566078 KLHL17Q6TDP4 642 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ZNF227Q86WZ6 799 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 RNF113BQ8IZP6 322 aaKnown RBP27.81■■■□□ 2.04
CTCF-203ENST00000566078 PSD4Q8NDX1 1056 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ZNF555Q8NEP9 628 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ELOA3Q8NG57 546 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 GNPDA2Q8TDQ7 276 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 LRCH1Q9Y2L9 728 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 MED31Q9Y3C7 131 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 NCKAP5O14513 1909 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 A0A087WUJ7 227 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 EFSO43281 561 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 PNMTP11086 282 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 TACR3P29371 465 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 CD96P40200 585 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ADARB1P78563 741 aaKnown RBP27.81■■■□□ 2.04
CTCF-203ENST00000566078 OR2M3Q8NG83 312 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 GABARAPL3Q9BY60 117 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ADAM19Q9H013 955 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 FAM118AQ9NWS6 357 aa27.81■■■□□ 2.04
CTCF-203ENST00000566078 ANKRD33BA6NCL7 494 aa27.8■■■□□ 2.04
CTCF-203ENST00000566078 WDPCPO95876 746 aa27.8■■■□□ 2.04
CTCF-203ENST00000566078 POLR2IP36954 125 aaKnown RBP27.8■■■□□ 2.04
CTCF-203ENST00000566078 GPR4P46093 362 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms