RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PTNP21246 168 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 PRPH2P23942 346 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 EDNRAP25101 427 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 ALDH3A1P30838 453 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 ETV4P43268 484 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 P2RX1P51575 399 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 EFNA4P52798 201 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 PRKAA2P54646 552 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 SUMO3P55854 103 aaPredicted RBP11.24□□□□□ -0.61
RNF40-208ENST00000565995 ZNF117Q03924 483 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 FOXF1Q12946 379 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 DUSP5Q16690 384 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 KLHL26Q53HC5 615 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 SPDYAQ5MJ70 313 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 FAM120AOSQ5T036 256 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 NOXRED1Q6NXP6 359 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 TMEM108Q6UXF1 575 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 NUDCD3Q8IVD9 361 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 SLC22A9Q8IVM8 553 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 C10orf107Q8IVU9 208 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 FBXL14Q8N1E6 418 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 CCNYL1Q8N7R7 359 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 GPR119Q8TDV5 335 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
RNF40-208ENST00000565995 EGLN2Q96KS0 407 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 MRGPRX4Q96LA9 322 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 KCNA7Q96RP8 456 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 CCL27Q9Y4X3 112 aa11.24□□□□□ -0.61
RNF40-208ENST00000565995 G3V2L1 256 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 UBFD1O14562 309 aaKnown RBP11.23□□□□□ -0.61
RNF40-208ENST00000565995 BIRC5O15392 142 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 RSL1D1O76021 490 aaKnown RBP11.23□□□□□ -0.61
RNF40-208ENST00000565995 DHRS4L1P0CG22 281 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 HPGDP15428 266 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
RNF40-208ENST00000565995 PRKCAP17252 672 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 CD40P25942 277 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 FOXA1P55317 472 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
RNF40-208ENST00000565995 RASGEF1BQ0VAM2 473 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 SQLEQ14534 574 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 PDK3Q15120 406 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 CHI3L2Q15782 390 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 STK11Q15831 433 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 LIPMQ5VYY2 423 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 FAM166AQ6J272 317 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 CBLN3Q6UW01 205 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 ZCCHC23Q6ZST2 131 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 MS4A4EQ96PG1 132 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 STACQ99469 402 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 BTBD2Q9BX70 525 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 GSTO2Q9H4Y5 243 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 MANSC1Q9H8J5 431 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 ACSS1Q9NUB1 689 aaPredicted RBP11.23□□□□□ -0.61
RNF40-208ENST00000565995 OXSMQ9NWU1 459 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 SLC25A15Q9Y619 301 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
RNF40-208ENST00000565995 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 SLC35F4A4IF30 521 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 NDUFS8O00217 210 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 SMAD9O15198 467 aaKnown RBP11.22□□□□□ -0.61
RNF40-208ENST00000565995 PDPK1O15530 556 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 TRIM13O60858 407 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 DNAJA2O60884 412 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 BGNP21810 368 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 FABP6P51161 128 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 GYS2P54840 703 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 NAA20P61599 178 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 GUCY1A3Q02108 690 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 HSPB3Q12988 150 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 SELENBP1Q13228 472 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 MLC1Q15049 377 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 TOMM34Q15785 309 aaPredicted RBP11.22□□□□□ -0.61
RNF40-208ENST00000565995 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 FBXW9Q5XUX1 488 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 KLHL17Q6TDP4 642 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 B3GLCTQ6Y288 498 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 GALNT5Q7Z7M9 940 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
RNF40-208ENST00000565995 ZFP28Q8NHY6 868 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 CDC26Q8NHZ8 85 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 PHOSPHO1Q8TCT1 267 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 LRRC8CQ8TDW0 803 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 C16orf58Q96GQ5 468 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 FCRL1Q96LA6 429 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 MUS81Q96NY9 551 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 PRR14Q9BWN1 585 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
RNF40-208ENST00000565995 POLR3HQ9Y535 204 aaPredicted RBP11.22□□□□□ -0.61
RNF40-208ENST00000565995 IGHV3-15A0A0B4J1V0 119 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 NPIPB9F8W1W9 429 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 OIP5O43482 229 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms