RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 HNRNPCL4P0DMR1 293 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 SHC1P29353 583 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 SLC7A1P30825 629 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 CPA2P48052 419 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 CARD18P57730 90 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 FBXL19-AS1Q494R0 122 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 LIN52Q52LA3 116 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 MRPL2Q5T653 305 aaKnown RBP16.79■□□□□ 0.28
CMTM3-210ENST00000565666 C3orf33Q6P1S2 294 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 DHDDSQ86SQ9 333 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 LUZP2Q86TE4 346 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 VRK2Q86Y07 508 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 OSTF1Q92882 214 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 REXO5Q96IC2 774 aaKnown RBP16.79■□□□□ 0.28
CMTM3-210ENST00000565666 TREX2Q9BQ50 279 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-210ENST00000565666 TRIM8Q9BZR9 551 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 RNF122Q9H9V4 155 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 SLC24A3Q9HC58 644 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 A4GALTQ9NPC4 353 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 TIGARQ9NQ88 270 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 ACER3Q9NUN7 267 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 MRGBPQ9NV56 204 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 DNAJB12Q9NXW2 375 aaKnown RBP16.79■□□□□ 0.28
CMTM3-210ENST00000565666 PACSIN3Q9UKS6 424 aa16.79■□□□□ 0.28
CMTM3-210ENST00000565666 TRBV5-3A0A0A0MS03 114 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 SMNDC1O75940 238 aaKnown RBP eCLIP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 AQP8O94778 261 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 PLGP00747 810 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 BMP2P12643 396 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 UQCRBP14927 111 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 PEX19P40855 299 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 DLX5P56178 289 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 MYBPHQ13203 477 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 SNTB1Q13884 538 aaKnown RBP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 NFYCQ13952 458 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 LARS2Q15031 903 aaKnown RBP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 GCNT6Q5T4J0 391 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 ZNF836Q6ZNA1 936 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 BBS10Q8TAM1 723 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 TSPEARQ8WU66 669 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 MAL2Q969L2 176 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 RBM24Q9BX46 236 aaKnown RBP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 ZNF232Q9UNY5 417 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 ZNF443Q9Y2A4 671 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-210ENST00000565666 UNC79Q9P2D8 2635 aa16.78■□□□□ 0.28
CMTM3-210ENST00000565666 INTS1Q8N201 2190 aaKnown RBP16.77■□□□□ 0.28
CMTM3-210ENST00000565666 ETV2O00321 342 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-210ENST00000565666 AP3D1O14617 1153 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 TNFSF13O75888 250 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 SSTR2P30874 369 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 IDH2P48735 452 aaKnown RBP16.77■□□□□ 0.28
CMTM3-210ENST00000565666 PLAURQ03405 335 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 VWA1Q6PCB0 445 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 DLEU7Q6UYE1 221 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 KIF18BQ86Y91 864 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 ZNF440Q8IYI8 595 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 ZNF295-AS1Q8N0V1 137 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 NFKBIDQ8NI38 313 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 CPNE4Q96A23 557 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-210ENST00000565666 ARMC7Q9H6L4 198 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 JKAMPQ9P055 326 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 IFT52Q9Y366 437 aa16.77■□□□□ 0.28
CMTM3-210ENST00000565666 SPIN1Q9Y657 262 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-210ENST00000565666 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 THBS1P07996 1170 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 ARAFP10398 606 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 TFPIP10646 304 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CPOXP36551 454 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 APOBEC1P41238 236 aaKnown RBP16.76■□□□□ 0.27
CMTM3-210ENST00000565666 KIR2DL2P43627 348 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CTBP2P56545 445 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 RUNDC3AQ59EK9 446 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 PRAMEF8Q5VWM4 474 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 PRAMEF7Q5VXH5 474 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 GRINAQ7Z429 371 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 RETREG3Q86VR2 466 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 DPP10Q8N608 796 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 C14orf79Q96F83 325 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 OR5B2Q96R09 309 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CGREF1Q99674 301 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 ZNF559Q9BR84 538 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CPPED1Q9BRF8 314 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-210ENST00000565666 IKZF5Q9H5V7 419 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 BCL2L10Q9HD36 194 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CTPS2Q9NRF8 586 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 RLIMQ9NVW2 624 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 KCNN3Q9UGI6 736 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CLEC4AQ9UMR7 237 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 EMC9Q9Y3B6 208 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 GMEB1Q9Y692 573 aa16.76■□□□□ 0.27
CMTM3-210ENST00000565666 CACNA1DQ01668 2161 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 A0A1W2PNR3 127 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 CDHR4A6H8M9 788 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 MSTNO14793 375 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 ADAM11O75078 769 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 PGM3O95394 542 aa16.75■□□□□ 0.27
CMTM3-210ENST00000565666 PABPC4LP0CB38 370 aaKnown RBP16.75■□□□□ 0.27
CMTM3-210ENST00000565666 GPX2P18283 190 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms