RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CFAP157Q5JU67 520 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 ATAD3BQ5T9A4 648 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 RSBN1Q5VWQ0 802 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 DNM1P46Q6ZS02 220 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 HSD17B13Q7Z5P4 300 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 MOB3BQ86TA1 216 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 ZNF589Q86UQ0 364 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 SKA3Q8IX90 412 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 ZNF683Q8IZ20 524 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 TMEM123Q8N131 208 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 DHRSXQ8N5I4 330 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 ATP6V0D2Q8N8Y2 350 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 ANKFN1Q8N957 763 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 SYT14Q8NB59 555 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 MAGEB18Q96M61 343 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 ZSCAN5AQ9BUG6 496 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 RNF126Q9BV68 326 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 TEX13BQ9BXU2 312 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 POLR1EQ9GZS1 481 aaKnown RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 NAT10Q9H0A0 1025 aaKnown RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 RHBGQ9H310 441 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 EHD1Q9H4M9 534 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 B3GNT2Q9NY97 397 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 IL36GQ9NZH8 169 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 WARS2Q9UGM6 360 aaKnown RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 TMCC3Q9ULS5 477 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 SCML2Q9UQR0 700 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 KIF25-AS1Q9Y6Z4 181 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 CHD4Q14839 1912 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 RAI1Q7Z5J4 1906 aaPredicted RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 ZNF646O15015 1829 aaPredicted RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 TNRQ92752 1358 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 IGHV1OR15-1A0A075B7D0 117 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 LRP5LA4QPB2 252 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 METTL21EPA6NDL7 271 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 K7N7A8 449 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 PRRG1O14668 218 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 HDAC3O15379 428 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 MAGEB3O15480 346 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 HCN1O60741 890 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 LYPD3O95274 346 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 SEMG1P04279 462 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 CD1EP15812 388 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 ZNF19P17023 458 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 POLR2EP19388 210 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 AQP1P29972 269 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 NMT1P30419 496 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 NTSP30990 170 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 PRPHP41219 470 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 P2RY1P47900 373 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 RIPK4P57078 832 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 ZNF79Q15937 498 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 TRIM16LQ309B1 348 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 CCDC137Q6PK04 289 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 TMEM179BQ7Z7N9 219 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 LCA5Q86VQ0 697 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 NRMQ8IXM6 262 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 OR4D5Q8NGN0 318 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 OR1F12Q8NHA8 337 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 TRMT10AQ8TBZ6 339 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 SLC5A11Q8WWX8 675 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 MARC2Q969Z3 335 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 C16orf74Q96GX8 76 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 C7orf34Q96L11 122 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 B3GALT6Q96L58 329 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 TXN2Q99757 166 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 SRXN1Q9BYN0 137 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 PCSK1NQ9UHG2 260 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 RPH3ALQ9UNE2 315 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 MRPS7Q9Y2R9 242 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 MEMO1Q9Y316 297 aa3.17□□□□□ -1.9
CHD9-215ENST00000565442 AK6Q9Y3D8 172 aaKnown RBP3.17□□□□□ -1.9
CHD9-215ENST00000565442 CROCCQ5TZA2 2017 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 N4BP1O75113 896 aaKnown RBP3.16□□□□□ -1.9
CHD9-215ENST00000565442 SLITRK3O94933 977 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 KRTAP1-4P0C5Y4 121 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 LAP3P28838 519 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 FGF9P31371 208 aaPredicted RBP3.16□□□□□ -1.9
CHD9-215ENST00000565442 LEPP41159 167 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 ELAVL3Q14576 367 aaKnown RBP3.16□□□□□ -1.9
CHD9-215ENST00000565442 SLC25A52Q3SY17 297 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 CFAP221Q4G0U5 840 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 TPGS2Q68CL5 300 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 TMEM225Q6GV28 225 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 VASH2Q86V25 355 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 CLEC4FQ8N1N0 589 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 ARL6IP6Q8N6S5 226 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 ANKRD49Q8WVL7 239 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 RLN3Q8WXF3 142 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 RAPGEF5Q92565 580 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 TGM7Q96PF1 710 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 GORASP2Q9H8Y8 452 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 ISG20L2Q9H9L3 353 aaKnown RBP3.16□□□□□ -1.9
CHD9-215ENST00000565442 ERVW-1Q9UQF0 538 aa3.16□□□□□ -1.9
CHD9-215ENST00000565442 KDRP35968 1356 aa3.15□□□□□ -1.9
CHD9-215ENST00000565442 IGHV7-81A0A0B4J1V7 117 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms