RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RFXANKO14593 260 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 SIAH2O43255 324 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 IL6P05231 212 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 CHRM4P08173 479 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 SESN3P58005 492 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 GSTA3Q16772 222 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 ANKRD34AQ69YU3 496 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 ST8SIA1Q92185 356 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 ATP6V1G3Q96LB4 118 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 KLHL4Q9C0H6 718 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 C12orf49Q9H741 205 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 TIGARQ9NQ88 270 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 SDR39U1Q9NRG7 319 aaPredicted RBP17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 PLSCR4Q9NRQ2 329 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 ZIM2Q9NZV7 527 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 SLC35A3Q9Y2D2 325 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 IGHV3-15A0A0B4J1V0 119 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 UBDO15205 165 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 CD1EP15812 388 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 PGCP20142 388 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 DNASE1P24855 282 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 SLC7A1P30825 629 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 LRRC74AQ0VAA2 488 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 MERTKQ12866 999 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 C3orf33Q6P1S2 294 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 FCRLAQ7L513 359 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 LSRQ86X29 649 aaPredicted RBP17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 OIT3Q8WWZ8 545 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 ZC3HAV1LQ96H79 300 aaKnown RBP17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 REXO5Q96IC2 774 aaKnown RBP17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 C7orf26Q96N11 449 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 TRNT1Q96Q11 434 aaKnown RBP17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 SLC38A1Q9H2H9 487 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 SLCO1B3Q9NPD5 702 aa17.82■□□□□ 0.44
SHCBP1-203ENST00000564272 DEFB108AA8MXU0 73 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 PABPC4LP0CB38 370 aaKnown RBP17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 ENPP1P22413 925 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 RYKP34925 604 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 ANXA11P50995 505 aaKnown RBP17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 GTDC1Q4AE62 458 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 AP1ARQ63HQ0 302 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 GTF2IRD2BQ6EKJ0 949 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 EPGNQ6UW88 154 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 C22orf34Q6ZV56 151 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 PLEKHM3Q6ZWE6 761 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 GTF2IRD2Q86UP8 949 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 TUSC5Q8IXB3 177 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 LRRC8CQ8TDW0 803 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 VPS33AQ96AX1 596 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 OR5B2Q96R09 309 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 FOXC2Q99958 501 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 ACER3Q9NUN7 267 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 KLHL13Q9P2N7 655 aa17.81■□□□□ 0.44
SHCBP1-203ENST00000564272 PRRC2AP48634 2157 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ADAM11O75078 769 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ATE1O95260 518 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 KRT75O95678 551 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 RAF1P04049 648 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 KLK2P20151 261 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 CRYGSP22914 178 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 POLR2JP52435 117 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 MVDP53602 400 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 KCNJ10P78508 379 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 TXNL4AP83876 142 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 RNPS1Q15287 305 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 STAC2Q6ZMT1 411 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 NUFIP2Q7Z417 695 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 MIER2Q8N344 545 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ARFGAP2Q8N6H7 521 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ZNF563Q8TA94 476 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 TMEM234Q8WY98 164 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 CNOT9Q92600 299 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 PIK3IP1Q96FE7 263 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 CXXC4Q9H2H0 198 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 ZNF226Q9NYT6 803 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 LIPT1Q9Y234 373 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 MED13LQ71F56 2210 aa17.8■□□□□ 0.44
SHCBP1-203ENST00000564272 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 NR2F1P10589 423 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 KEAP1Q14145 624 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 MAPK11Q15759 364 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 TMEM201Q5SNT2 666 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 TFAP2EQ6VUC0 442 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 LRRC74BQ6ZQY2 392 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 AURKBQ96GD4 344 aaPredicted RBP17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 EBF4Q9BQW3 602 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 CCDC106Q9BWC9 280 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 RMND5AQ9H871 391 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 EXOSC3Q9NQT5 275 aaKnown RBP17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 CTPS2Q9NRF8 586 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 SERINC1Q9NRX5 453 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 EDARQ9UNE0 448 aa17.79■□□□□ 0.44
SHCBP1-203ENST00000564272 AP3D1O14617 1153 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 SMAD9O15198 467 aaKnown RBP17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 PRKD3O94806 890 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 ANP32DO95626 131 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 ETFAP13804 333 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 RPS4Y1P22090 263 aaKnown RBP17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 RAC3P60763 192 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms