RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 EIF1P41567 113 aaKnown RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 ST13P50502 369 aaKnown RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 POLR2HP52434 150 aaKnown RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 HMGA2P52926 109 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 UGT2B15P54855 530 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 CXADRP78310 365 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MICAQ29983 383 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.67□□□□□ -0.546e-8■□□□□ 8.3
CLK3-214ENST00000564096 ELOA3BQ3SY89 546 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 OTUD3Q5T2D3 398 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 LPCAT4Q643R3 524 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 TIGD3Q6B0B8 471 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 SLC25A25Q6KCM7 469 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 EPHX4Q8IUS5 362 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ZADH2Q8N4Q0 377 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 CBR4Q8N4T8 237 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ELOA3Q8NG57 546 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 OR2M3Q8NG83 312 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 PIGXQ8TBF5 258 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 GPR119Q8TDV5 335 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 GIPC3Q8TF64 312 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 C3orf49Q96BT1 292 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MRGPRX4Q96LA9 322 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 SIGLEC12Q96PQ1 595 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 PSD2Q9BQI7 771 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 SLC19A3Q9BZV2 496 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 DSN1Q9H410 356 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ZFP64Q9NPA5 681 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MAN2C1Q9NTJ4 1040 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MED17Q9NVC6 651 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 VNN3Q9NY84 501 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 PLA2G3Q9NZ20 509 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MED11Q9P086 117 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 NTNG1Q9Y2I2 539 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 C15orf41Q9Y2V0 281 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 SPIN1Q9Y657 262 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 SPTBN4Q9H254 2564 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 TRBV4-1A0A0J9YWV2 114 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 SH3PXD2BA1X283 911 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ADAM10O14672 748 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 EI24O14681 340 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ADAM11O75078 769 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 CBR3O75828 277 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ADAP00813 363 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 SP1P08047 785 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ANXA8P13928 327 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ZNF17P17021 662 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 GCKP35557 465 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 LIMS1P48059 325 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 HSPA13P48723 471 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 TNFSF10P50591 281 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ALDH3A2P51648 485 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 IST1P53990 364 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 DSCR4P56555 118 aaPredicted RBP11.66□□□□□ -0.54
CLK3-214ENST00000564096 GPR85P60893 370 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 DAG1Q14118 895 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 LRRC36Q1X8D7 754 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 RFX4Q33E94 735 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ZNF766Q5HY98 468 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 OR5M10Q6IEU7 315 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 TTC33Q6PID6 262 aaPredicted RBP11.66□□□□□ -0.54
CLK3-214ENST00000564096 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 RNF113BQ8IZP6 322 aaKnown RBP11.66□□□□□ -0.54
CLK3-214ENST00000564096 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 OR4K5Q8NGD3 323 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 SNRNP27Q8WVK2 155 aaKnown RBP11.66□□□□□ -0.54
CLK3-214ENST00000564096 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 TMEM5Q9Y2B1 443 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 MED31Q9Y3C7 131 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 DCHS1Q96JQ0 3298 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
CLK3-214ENST00000564096 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 C7orf72A4D263 438 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 HTR3EA5X5Y0 456 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 C17orf51A8MQB3 221 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 ETV2O00321 342 aaPredicted RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 PRKCAP17252 672 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 IGFBP5P24593 272 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 CXCR1P25024 350 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 DPP4P27487 766 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 ELK4P28324 431 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 TACR3P29371 465 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 SRD5A2P31213 254 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 APOBEC1P41238 236 aaKnown RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 MAP2K6P52564 334 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 RAD23AP54725 363 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 DLX5P56178 289 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 PLGLB1Q02325 96 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 MERTKQ12866 999 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 FOXF1Q12946 379 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 FOXD4Q12950 439 aaPredicted RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 PPP1R8Q12972 351 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms