RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 HOXD4P09016 255 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 HK1P19367 917 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 KCNJ5P48544 419 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 DLX5P56178 289 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 TRAP1Q12931 704 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 TRIM25Q14258 630 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 BCL2A1Q16548 175 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 LRRC23Q53EV4 343 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 GLYATQ6IB77 296 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 VRK2Q86Y07 508 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 GTPBP8Q8N3Z3 284 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 GATSQ8NAP1 163 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 FAM83FQ8NEG4 500 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 SLC25A43Q8WUT9 341 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 ZG16BQ96DA0 208 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 SH3YL1Q96HL8 342 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 NSMCE2Q96MF7 247 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 ZNF559Q9BR84 538 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 THTPAQ9BU02 230 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 TRIM2Q9C040 744 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 PAQR5Q9NXK6 330 aaPredicted RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 DNAJB12Q9NXW2 375 aaKnown RBP17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 ACTR3BQ9P1U1 418 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 NPIPA1Q9UND3 350 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 NCKAP5O14513 1909 aa17.13■□□□□ 0.33
SYNGR3-203ENST00000563869 ETV2O00321 342 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 LGI1O95970 557 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 APOBEC1P41238 236 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 RGS8P57771 180 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 PMP22Q01453 160 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 CYBRD1Q53TN4 286 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 CMPK2Q5EBM0 449 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 SLC25A53Q5H9E4 307 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 SWT1Q5T5J6 900 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 RAET1LQ5VY80 246 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 WBP2NLQ6ICG8 309 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 OR5M10Q6IEU7 315 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 TRILQ7L0X0 811 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 GRINAQ7Z429 371 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 GPR119Q8TDV5 335 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 DNAJA4Q8WW22 397 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 SFXN2Q96NB2 322 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 CHST11Q9NPF2 352 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 MED17Q9NVC6 651 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 RPS6KB2Q9UBS0 482 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 FBXL2Q9UKC9 423 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 AP4B1Q9Y6B7 739 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 PCNX3Q9H6A9 2034 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 ADGRG4Q8IZF6 3080 aa17.12■□□□□ 0.33
SYNGR3-203ENST00000563869 ZNF407Q9C0G0 2248 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 C2orf72A6NCS6 295 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 AP3D1O14617 1153 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 ADAM10O14672 748 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 FESP07332 822 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 RFPL3SP0C7P2 107 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 PEPDP12955 493 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 SLC1A3P43003 542 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 CLK1P49759 484 aaKnown RBP17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 EPS8Q12929 822 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 PLPPR5Q32ZL2 321 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 PDSS1Q5T2R2 415 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 C5orf46Q6UWT4 87 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 GFRALQ6UXV0 394 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 DHFR2Q86XF0 187 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 C10orf67Q8IYJ2 551 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 ZNF808Q8N4W9 903 aaPredicted RBP17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 LSMEM1Q8N8F7 131 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 FBXO27Q8NI29 283 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 GEMIN6Q8WXD5 167 aaKnown RBP17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 TAMM41Q96BW9 452 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 SLC7A6OSQ96CW6 309 aaPredicted RBP17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 TMEM27Q9HBJ8 222 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 ACER3Q9NUN7 267 aa17.11■□□□□ 0.33
SYNGR3-203ENST00000563869 PRRG2O14669 202 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 GABRA1P14867 456 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 ITGA2P17301 1181 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 RFC3P40938 356 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 DMTNQ08495 405 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 SELENBP1Q13228 472 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 QPRTQ15274 297 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 RNFT1Q5M7Z0 435 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 WLSQ5T9L3 541 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 CBLN3Q6UW01 205 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 MRGPRGQ86SM5 289 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 CNOT9Q92600 299 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 CCDC120Q96HB5 630 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 RTN4RQ9BZR6 473 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 DEFB127Q9H1M4 99 aa17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 DCAF13Q9NV06 445 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-203ENST00000563869 CELSR1Q9NYQ6 3014 aa17.09■□□□□ 0.33
SYNGR3-203ENST00000563869 CENPVL1A0A0U1RR11 272 aa17.09■□□□□ 0.33
SYNGR3-203ENST00000563869 FIGNL2A6NMB9 653 aa17.09■□□□□ 0.33
SYNGR3-203ENST00000563869 GSC2O15499 205 aa17.09■□□□□ 0.33
SYNGR3-203ENST00000563869 ZIC3O60481 467 aa17.09■□□□□ 0.33
SYNGR3-203ENST00000563869 PNMTP11086 282 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms