RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ACOT4Q8N9L9 421 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 RAB1CQ92928 201 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 ARL5BQ96KC2 179 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 TSNARE1Q96NA8 513 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 CDK15Q96Q40 435 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 ZNF300Q96RE9 604 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 GPR21Q99679 349 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 FRMD8P1Q9BZ68 369 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 ROGDIQ9GZN7 287 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 TMEM185BQ9H7F4 350 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 UBAP1Q9NZ09 502 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 CFL2Q9Y281 166 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SERTM1A2A2V5 107 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 C7orf72A4D263 438 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SCO2O43819 266 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SCELO95171 688 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CECR9P0C854 216 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CD28P10747 220 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 S1PR1P21453 382 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 DRD5P21918 477 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 ME2P23368 584 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 ATP5A1P25705 553 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 EVI2BP34910 448 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CRYBB2P43320 205 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SEC24CP53992 1094 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 TGM3Q08188 693 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 LCP2Q13094 533 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SNX1Q13596 522 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 HEPACAMQ14CZ8 416 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 C3orf36Q3SXR2 165 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 TTLL9Q3SXZ7 439 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CYP27C1Q4G0S4 372 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 TECRLQ5HYJ1 363 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 DUPD1Q68J44 220 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 ANKRD16Q6P6B7 361 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 DRICH1Q6PGQ1 229 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SDCCAG8Q86SQ7 713 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 TMPRSS11BQ86T26 416 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 PTCD3Q96EY7 689 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 NAP1L3Q99457 506 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 NPAS1Q99742 590 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CITED2Q99967 270 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 LRRC1Q9BTT6 524 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 MRPL37Q9BZE1 423 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 DPAGT1Q9H3H5 408 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 FBXO6Q9NRD1 293 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 SDHAF3Q9NRP4 125 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 MS4A12Q9NXJ0 267 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 BFARQ9NZS9 450 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 IL20RAQ9UHF4 553 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 GLS2Q9UI32 602 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 CMAHPQ9Y471 501 aa8.87□□□□□ -0.99
HDGFL3-204ENST00000563790 E5RI56 91 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 ANP32AP39687 249 aaKnown RBP8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 SLC1A2P43004 574 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 ALDH3B1P43353 468 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 MAGEA3P43357 314 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 PPICP45877 212 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 CDK16Q00536 496 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 DHX9Q08211 1270 aaKnown RBP8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 ARMC3Q5W041 872 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 KLHL24Q6TFL4 600 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 C1orf122Q6ZSJ8 110 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 USP51Q70EK9 711 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 UBE3DQ7Z6J8 389 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 POU5F2Q8N7G0 328 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 EEF1AKMT1Q8WVE0 214 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 ITCHQ96J02 903 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 PPANQ9NQ55 473 aaKnown RBP8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 VDAC3Q9Y277 283 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 RNF213Q63HN8 5207 aa8.86□□□□□ -0.99
HDGFL3-204ENST00000563790 HAUS5O94927 633 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 IGLV1-44P01699 117 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 RBMY1A1P0DJD3 496 aaKnown RBP8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 PAX7P23759 505 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 GABRB3P28472 473 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 SHC1P29353 583 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 KIR2DS4P43632 304 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 PNLIPRP2P54317 469 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 BASP1P80723 227 aaKnown RBP8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 PAX2Q02962 417 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 STX5Q13190 355 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 CCNG2Q16589 344 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 MSMPQ1L6U9 139 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 C18orf63Q68DL7 685 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 UGT3A1Q6NUS8 523 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 LRRN1Q6UXK5 716 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 TMIGD1Q6UXZ0 262 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 VN1R5Q7Z5H4 357 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 LILRA2Q8N149 483 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
HDGFL3-204ENST00000563790 CCDC89Q8N998 374 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms