RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF100Q8IYN0 542 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 ZNF433Q8N7K0 673 aaPredicted RBP16.48■□□□□ 0.23
NME3-204ENST00000563498 ZNF524Q96C55 264 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 ZNF300Q96RE9 604 aaPredicted RBP16.48■□□□□ 0.23
NME3-204ENST00000563498 DHRS9Q9BPW9 319 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 ANKZF1Q9H8Y5 726 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 GPATCH2Q9NW75 528 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 FAF1Q9UNN5 650 aaPredicted RBP16.48■□□□□ 0.23
NME3-204ENST00000563498 DNAJC15Q9Y5T4 150 aa16.48■□□□□ 0.23
NME3-204ENST00000563498 ESPNB1AK53 854 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 SCAMP2O15127 329 aaKnown RBP16.47■□□□□ 0.23
NME3-204ENST00000563498 DNAJA2O60884 412 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 LINC00032P0C843 101 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 UBL4AP11441 157 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 SLC25A16P16260 332 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 PTAFRP25105 342 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 THBS2P35442 1172 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 CCT3P49368 545 aaKnown RBP16.47■□□□□ 0.23
NME3-204ENST00000563498 RNF144AP50876 292 aaPredicted RBP16.47■□□□□ 0.23
NME3-204ENST00000563498 PDK3Q15120 406 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 NDUFAF6Q330K2 333 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 FBXW9Q5XUX1 488 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 NATD1Q8N6N6 113 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 OR2W6PQ8NHA6 318 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 OR5P2Q8WZ92 322 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 OR5B2Q96R09 309 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 EMC3Q9P0I2 261 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 LPAR3Q9UBY5 353 aa16.47■□□□□ 0.23
NME3-204ENST00000563498 IGKV3D-15A0A087WSY6 115 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 TMEM114B3SHH9 223 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 C9JVG2 144 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 E7EQL1 145 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 H7C417 338 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 H6PDO95479 791 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 DHRS4L1P0CG22 281 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 LAMP1P11279 417 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 PTNP21246 168 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 CSNK2A1P68400 391 aaPredicted RBP16.46■□□□□ 0.23
NME3-204ENST00000563498 TP53BP2Q13625 1128 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 RAB35Q15286 201 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 GALNTL6Q49A17 601 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 TIGD2Q4W5G0 525 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 KLHL17Q6TDP4 642 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
NME3-204ENST00000563498 MUC15Q8N387 334 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 TMCO5AQ8N6Q1 288 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 ZNF614Q8N883 585 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 CCDC63Q8NA47 563 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 OR7A2PQ8NGA2 310 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 RFWD2Q8NHY2 731 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 SFXN5Q8TD22 340 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 ST8SIA1Q92185 356 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 ZNF775Q96BV0 537 aaPredicted RBP16.46■□□□□ 0.23
NME3-204ENST00000563498 MOAP1Q96BY2 351 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 C16orf45Q96MC5 204 aaPredicted RBP16.46■□□□□ 0.23
NME3-204ENST00000563498 KCNK17Q96T54 332 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 BEX2Q9BXY8 128 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 TXLNGYQ9BZA5 131 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 NMUR2Q9GZQ4 415 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 SERINC1Q9NRX5 453 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 FIS1Q9Y3D6 152 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 KCNE3Q9Y6H6 103 aa16.46■□□□□ 0.23
NME3-204ENST00000563498 FGF4P08620 206 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 MAPK1P28482 360 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 DIO1P49895 249 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 CCR4P51679 360 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 CASP9P55211 416 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 LSM12Q3MHD2 195 aaKnown RBP16.45■□□□□ 0.22
NME3-204ENST00000563498 ABLIM2Q6H8Q1 611 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 SLC22A25Q6T423 547 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 TMPPEQ6ZT21 453 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 FBXL14Q8N1E6 418 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 SLC25A43Q8WUT9 341 aaPredicted RBP16.45■□□□□ 0.22
NME3-204ENST00000563498 LAT2Q9GZY6 243 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 ATAD3AQ9NVI7 634 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 MID2Q9UJV3 735 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 POU2F3Q9UKI9 436 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 SLC25A15Q9Y619 301 aa16.45■□□□□ 0.22
NME3-204ENST00000563498 PLCE1Q9P212 2302 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 SERINC4A6NH21 518 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 RAD51DO75771 328 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 CD40P25942 277 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 SKP2Q13309 424 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 UGT3A2Q3SY77 523 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 SPDYE7PQ495Y7 208 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 CYB5R2Q6BCY4 276 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 ZNF544Q6NX49 715 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 MTDHQ86UE4 582 aaKnown RBP16.44■□□□□ 0.22
NME3-204ENST00000563498 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 TMEM234Q8WY98 164 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 FAM168AQ92567 244 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 PROX1Q92786 737 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 APH1AQ96BI3 265 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 SDF2Q99470 211 aa16.44■□□□□ 0.22
NME3-204ENST00000563498 THUMPD3Q9BV44 507 aaKnown RBP16.44■□□□□ 0.22
NME3-204ENST00000563498 GATA5Q9BWX5 397 aaPredicted RBP16.44■□□□□ 0.22
NME3-204ENST00000563498 NBEAL1Q6ZS30 2694 aa16.43■□□□□ 0.22
NME3-204ENST00000563498 SULT2B1O00204 365 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms