RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GPC6Q9Y625 555 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TRAV20A0A0B4J274 112 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 CCDC189A1A4V9 331 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 FAM159BA6NKW6 160 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TTC36A6NLP5 189 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 ESPNB1AK53 854 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 PPP6CO00743 305 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 PCDH7O60245 1069 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 KCNK2O95069 426 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TFP02787 698 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 ACP2P11117 423 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TYK2P29597 1187 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 P2RX1P51575 399 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 NCBP2P52298 156 aaKnown RBP eCLIP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC16A1P53985 500 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNHIT3Q15649 155 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TECRLQ5HYJ1 363 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 ELFN2Q5R3F8 820 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 EXOSC6Q5RKV6 272 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 C9orf135Q5VTT2 229 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TTC19Q6DKK2 380 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 RAPH1Q70E73 1250 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 RPS27LQ71UM5 84 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 UBE2J2Q8N2K1 259 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 PTGR2Q8N8N7 351 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 OR51F2Q8NH61 342 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 RNF217Q8TC41 542 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 GPR119Q8TDV5 335 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 SELENOMQ8WWX9 145 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 TAF15Q92804 592 aaKnown RBP eCLIP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 DVL3Q92997 716 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 GIMAP5Q96F15 307 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 AMDHD1Q96NU7 426 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 BBS4Q96RK4 519 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 SHCBP1LQ9BZQ2 653 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 ELOVL6Q9H5J4 265 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 C3orf14Q9HBI5 128 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 LZTFL1Q9NQ48 299 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 UBQLN4Q9NRR5 601 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 DDX28Q9NUL7 540 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 GIMAP4Q9NUV9 329 aa6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 DDX18Q9NVP1 670 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 CPSF2Q9P2I0 782 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 NOSIPQ9Y314 301 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-206ENST00000563343 NUP214P35658 2090 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 TCRBV9S1A1TA0A576 114 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 HMX2A2RU54 273 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 hCG_2039718K7EN88 272 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 PGRMC1O00264 195 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SEC31AO94979 1220 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 BCL10O95999 233 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 RPS17P08708 135 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 NUDT17P0C025 328 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 DDX5P17844 614 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 ADRA2CP18825 462 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 PRTN3P24158 256 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 CRABP2P29373 138 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 GCH1P30793 250 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC7A1P30825 629 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 CALCRP30988 508 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 ARL1P40616 181 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 ASMTP46597 345 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 DIO1P49895 249 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SUMO3P55854 103 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 PRPS1P60891 318 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 IL13RA1P78552 427 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 NAAAQ02083 359 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 HGFACQ04756 655 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SRSF4Q08170 494 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 HEPACAMQ14CZ8 416 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 NDUFAF6Q330K2 333 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 CCNJQ5T5M9 372 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 FAHD2BQ6P2I3 314 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 GALNT18Q6P9A2 607 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 CYS1Q717R9 158 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 TEX29Q8N6K0 151 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 OR6Y1Q8NGX8 325 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 GPR151Q8TDV0 419 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 ATP6V1E2Q96A05 226 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 FAHD2AQ96GK7 314 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 APIPQ96GX9 242 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC38A2Q96QD8 506 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 OR5B2Q96R09 309 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 NARFLQ9H6Q4 476 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SEC61A2Q9H9S3 476 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 EQTNQ9NQ60 294 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC7A10Q9NS82 523 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 TAS2R7Q9NYW3 318 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 TREM2Q9NZC2 230 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 EMC3Q9P0I2 261 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 PDP1Q9P0J1 537 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 CRNNQ9UBG3 495 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 VPS29Q9UBQ0 182 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 FBXO9Q9UK97 447 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 GRID1Q9ULK0 1009 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
HERPUD1-206ENST00000563343 DNAJC9-AS1A6NH13 148 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms