RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 NEURL3Q96EH8 262 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 CCDC115Q96NT0 180 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 SLC35A5Q9BS91 424 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 QRSL1Q9H0R6 528 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 WDR55Q9H6Y2 383 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 COQ10BQ9H8M1 238 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 DLL4Q9NR61 685 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 AIG1Q9NVV5 245 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 THAP1Q9NVV9 213 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 BEX4Q9NWD9 120 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 BTNL2Q9UIR0 455 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 GPR45Q9Y5Y3 372 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 NUP214P35658 2090 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 IGHV3-15A0A0B4J1V0 119 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 GOLGA8QA0A0J9YX86 632 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 A0A1W2PNR3 127 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 GOLGA8OA6NCC3 632 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 GOLGA8NF8WBI6 632 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 HMGN4O00479 90 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 HDAC3O15379 428 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 KLF4O43474 513 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 DIAPH2O60879 1101 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 CSTAP01040 98 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 YES1P07947 543 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 KITP10721 976 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 PPP3CBP16298 524 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 EPHA3P29320 983 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 SLC7A1P30825 629 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 PGM1P36871 562 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 SESN3P58005 492 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 RAC3P60763 192 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 MAGOHP61326 146 aaKnown RBP9.16□□□□□ -0.94
CLK3-205ENST00000561673 SELENBP1Q13228 472 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 ACKR1Q16570 336 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 TMEM201Q5SNT2 666 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 FRRS1Q6ZNA5 592 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 HMGN2P46Q86SG4 172 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 INPP5KQ9BT40 448 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 ACTR6Q9GZN1 396 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 SAP130Q9H0E3 1048 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 UBTD1Q9HAC8 227 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 POLE3Q9NRF9 147 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 KLHL13Q9P2N7 655 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 MARCOQ9UEW3 520 aaPredicted RBP9.16□□□□□ -0.94
CLK3-205ENST00000561673 GPR52Q9Y2T5 361 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 WDR45Q9Y484 360 aa9.16□□□□□ -0.94
CLK3-205ENST00000561673 CLDN24A6NM45 220 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 GCM2O75603 506 aaPredicted RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 H6PDO95479 791 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PGRP06401 933 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PGCP20142 388 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PSMB1P20618 241 aaKnown RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 CDKN2CP42773 168 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 KHKP50053 298 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 SLC18A1P54219 525 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 KCNJ10P78508 379 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 CHRNEQ04844 493 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 MERTKQ12866 999 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 SYPL1Q16563 259 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 GPAT3Q53EU6 434 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 C3orf33Q6P1S2 294 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 TFAP2EQ6VUC0 442 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ZNF621Q6ZSS3 439 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PLEKHM3Q6ZWE6 761 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 RNF130Q86XS8 419 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 GABRG1Q8N1C3 465 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ZNF619Q8N2I2 560 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 SLC43A2Q8N370 569 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 FAM71CQ8NEG0 241 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 OIT3Q8WWZ8 545 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 TMEM234Q8WY98 164 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ST8SIA1Q92185 356 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PIGTQ969N2 578 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ARL8AQ96BM9 186 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 OR5B2Q96R09 309 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 OR52E6Q96RD3 313 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PANX1Q96RD7 426 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 PIP5K1AQ99755 562 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 HDHD5Q9BXW7 423 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 OR10A4Q9H209 315 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 GSX1Q9H4S2 264 aaPredicted RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 MANSC1Q9H8J5 431 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 BCO1Q9HAY6 547 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 GP6Q9HCN6 339 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 FANCFQ9NPI8 374 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 SERINC1Q9NRX5 453 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ACER3Q9NUN7 267 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.94
CLK3-205ENST00000561673 SLC35A3Q9Y2D2 325 aa9.15□□□□□ -0.94
CLK3-205ENST00000561673 ACANP16112 2415 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 C2CD3Q4AC94 2353 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 FLNAP21333 2647 aaKnown RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 SLCO1B7G3V0H7 640 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms