RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SLC22A20A6NK97 555 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 NPIPB9F8W1W9 429 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 PYCARD-AS1I3L0S3 204 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 SYT5O00445 386 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 CIB2O75838 187 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 OR6A2O95222 327 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 AHSA1O95433 338 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 IFNW1P05000 195 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 GKN3PP0CG01 181 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 PRKCAP17252 672 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TACR3P29371 465 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 MVDP53602 400 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 CLDN15P56746 228 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 OR2B6P58173 313 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 SLC25A3Q00325 362 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 EPS8Q12929 822 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 FOXF1Q12946 379 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 BNIP2Q12982 314 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 SKP2Q13309 424 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 MAPK14Q16539 360 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 NDUFAF6Q330K2 333 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 ALG10BQ5I7T1 473 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TMEM201Q5SNT2 666 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 FNDC7Q5VTL7 733 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 ULK3Q6PHR2 472 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TTC33Q6PID6 262 aaPredicted RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 CBLN3Q6UW01 205 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 C5orf46Q6UWT4 87 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 Q6ZPB1 254 aaPredicted RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 NET1Q7Z628 596 aaPredicted RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 SLC15A3Q8IY34 581 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 C10orf67Q8IYJ2 551 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 ULK2Q8IYT8 1036 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 OR2V1Q8NHB1 315 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 OSTF1Q92882 214 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 RELTQ969Z4 430 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 CPNE4Q96A23 557 aaPredicted RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 ZG16BQ96DA0 208 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 MCHR1Q99705 422 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TACO1Q9BSH4 297 aaKnown RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 TRIM8Q9BZR9 551 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 MUC13Q9H3R2 512 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TMEM185BQ9H7F4 350 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 GLRX2Q9NS18 164 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 RLIMQ9NVW2 624 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 CCDC88CQ9P219 2028 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TNFRSF10DQ9UBN6 386 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 PRPF19Q9UMS4 504 aaKnown RBP9.69□□□□□ -0.86
TPM1-229ENST00000561242 LIPGQ9Y5X9 500 aa9.69□□□□□ -0.86
TPM1-229ENST00000561242 TMED7-TICAM2A0A0A6YYA0 188 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 FAAHO00519 579 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 OR2T1O43869 369 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 EIF1BO60739 113 aaKnown RBP9.68□□□□□ -0.86
TPM1-229ENST00000561242 MFN2O95140 757 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 EPPINO95925 133 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SERPINA1P01009 418 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 OPN1SWP03999 348 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 OPN1LWP04000 364 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 GPIP06744 558 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 FESP07332 822 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 ENPP1P22413 925 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 HTR1EP28566 365 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 CHRNB4P30926 498 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 OPRM1P35372 400 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 UQCRFS1P47985 274 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 KCNJ5P48544 419 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 GSK3BP49841 420 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SMIM11AP58511 58 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SLC35A1P78382 337 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 CRYZQ08257 329 aaKnown RBP9.68□□□□□ -0.86
TPM1-229ENST00000561242 SELPLGQ14242 412 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 MFSD13AQ14CX5 517 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 IFI44LQ53G44 452 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 CYBRD1Q53TN4 286 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 DEF8Q6ZN54 512 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 CCDC80Q76M96 950 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 MRGPRGQ86SM5 289 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SLC43A2Q8N370 569 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 PHF10Q8WUB8 498 aaKnown RBP9.68□□□□□ -0.86
TPM1-229ENST00000561242 RNF138Q8WVD3 245 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 WNT2BQ93097 391 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SDCCAG3Q96C92 435 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 WDYHV1Q96HA8 205 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 ZNF583Q96ND8 569 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 ZFP3Q96NJ6 502 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 THTPAQ9BU02 230 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 FNDC11Q9BVV2 318 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 POLR2J2Q9GZM3 115 aaKnown RBP9.68□□□□□ -0.86
TPM1-229ENST00000561242 POLR2J3Q9H1A7 115 aaKnown RBP9.68□□□□□ -0.86
TPM1-229ENST00000561242 KCNJ16Q9NPI9 418 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 CMTM6Q9NX76 183 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 SPRR3Q9UBC9 169 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 EGFL7Q9UHF1 273 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 ZNF835Q9Y2P0 537 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 TMED7Q9Y3B3 224 aa9.68□□□□□ -0.86
TPM1-229ENST00000561242 HDGFL3Q9Y3E1 203 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms