RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FKBP2P26885 142 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 LOXP28300 417 aaPredicted RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ELK4P28324 431 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 SFTPDP35247 375 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 IDH3AP50213 366 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF141Q15928 474 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF239Q16600 458 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ZSWIM7Q19AV6 140 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 C6orf10Q5SRN2 563 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 PDZK1Q5T2W1 519 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 AP1ARQ63HQ0 302 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 TNFAIP8L2Q6P589 184 aaPredicted RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ESPNLQ6ZVH7 1005 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 FBXO27Q8NI29 283 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 TEX37Q96LM6 180 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 TRNT1Q96Q11 434 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF350Q9GZX5 532 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ARMC7Q9H6L4 198 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 SLCO1B3Q9NPD5 702 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 FANCFQ9NPI8 374 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 SERINC1Q9NRX5 453 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 MCTS1Q9ULC4 181 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 PROCRQ9UNN8 238 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 FCMRO60667 390 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 BCAS1O75363 584 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-204ENST00000561065 SYNGR4O95473 234 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 CSTAP01040 98 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 NR2F1P10589 423 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 UQCRBP14927 111 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 PRKCAP17252 672 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 CD53P19397 219 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 PGCP20142 388 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 PPIBP23284 216 aaKnown RBP14.26□□□□□ -0.13
LMX1B-204ENST00000561065 PLAURQ03405 335 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 HBMQ6B0K9 141 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 RNF130Q86XS8 419 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 TGIF2LYQ8IUE0 185 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 KRTAP1-3Q8IUG1 177 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 CMIPQ8IY22 773 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 LILRA2Q8N149 483 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 ZNF619Q8N2I2 560 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 TMCO5AQ8N6Q1 288 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 OR6K3Q8NGY3 331 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 OR5W2Q8NH69 310 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 GPR119Q8TDV5 335 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 ABHD3Q8WU67 409 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 GMPPAQ96IJ6 420 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-204ENST00000561065 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 LAT2Q9GZY6 243 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 NDRG3Q9UGV2 375 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 MKLN1Q9UL63 735 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
LMX1B-204ENST00000561065 ETV2O00321 342 aaPredicted RBP14.25□□□□□ -0.13
LMX1B-204ENST00000561065 UGT2B17O75795 530 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 CRYGSP22914 178 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 IL12AP29459 219 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 AGTR1P30556 359 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 ATP4BP51164 291 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 FOXD4Q12950 439 aaPredicted RBP14.25□□□□□ -0.13
LMX1B-204ENST00000561065 SKP2Q13309 424 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 MAPK14Q16539 360 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 EXOC3L2Q2M3D2 409 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 DEFB113Q30KQ7 82 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 METTL21CQ5VZV1 264 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 ANKRD34AQ69YU3 496 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 LRRC74BQ6ZQY2 392 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 PEX5LQ8IYB4 626 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 RNF128Q8TEB7 428 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 ROBO4Q8WZ75 1007 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 RAB8BQ92930 207 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 ZC3HAV1LQ96H79 300 aaKnown RBP14.25□□□□□ -0.13
LMX1B-204ENST00000561065 MED18Q9BUE0 208 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 SAP130Q9H0E3 1048 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 TPT1P8Q9HAU6 139 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 MED4Q9NPJ6 270 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 GLRX2Q9NS18 164 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 ELOVL5Q9NYP7 299 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 EMC9Q9Y3B6 208 aa14.25□□□□□ -0.13
LMX1B-204ENST00000561065 PRAMEF27A3QJZ7 478 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 C16orf97H3BN30 126 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 HMGN4O00479 90 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 ATP8B1O43520 1251 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 KIAA0513O60268 411 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CYP7B1O75881 506 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 GSNP06396 782 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 THBDP07204 575 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 TROVE2P10155 538 aaKnown RBP eCLIP14.24□□□□□ -0.13
LMX1B-204ENST00000561065 IL7RP16871 459 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 NCF2P19878 526 aaPredicted RBP14.24□□□□□ -0.13
LMX1B-204ENST00000561065 KLK2P20151 261 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CRATP43155 626 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 KCNJ5P48544 419 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CCR4P51679 360 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 RIPPLY3P57055 190 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 CARD18P57730 90 aa14.24□□□□□ -0.13
LMX1B-204ENST00000561065 ADAM8P78325 824 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms